RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
ATG4B-221ENST00000483778 CDC42EP1Q00587 391 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 CYP4A11Q02928 519 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 ANKRD54Q6NXT1 300 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 CATSPER4Q7RTX7 472 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
ATG4B-221ENST00000483778 FEZF2Q8TBJ5 459 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 AUTS2Q8WXX7 1259 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 RPGRIP1Q96KN7 1286 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 POP1Q99575 1024 aaKnown RBP20.17■□□□□ 0.82
ATG4B-221ENST00000483778 CDCA3Q99618 268 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-221ENST00000483778 LXNQ9BS40 222 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 TRAIPQ9BWF2 469 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 NRDE2Q9H7Z3 1164 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 FAM105AQ9NUU6 356 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 ARIH1Q9Y4X5 557 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-221ENST00000483778 COL4A3BPQ9Y5P4 624 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 SLITRK3O94933 977 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 NEFLP07196 543 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 HOXA11P31270 313 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-221ENST00000483778 ANAPC15P60006 121 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 KRT17Q04695 432 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 LAMTOR4Q0VGL1 99 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 UBXN11Q5T124 520 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 AGMOQ6ZNB7 445 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 ZNF280BQ86YH2 543 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 C4orf19Q8IY42 314 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
ATG4B-221ENST00000483778 NGRNQ9NPE2 291 aaKnown RBP20.16■□□□□ 0.82
ATG4B-221ENST00000483778 TBC1D13Q9NVG8 400 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 DNAJB4Q9UDY4 337 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 INPP5FQ9Y2H2 1132 aa20.16■□□□□ 0.82
ATG4B-221ENST00000483778 BTBD18B2RXH4 712 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 TBX3O15119 743 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 ZNF623O75123 536 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 CXCL14O95715 111 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 XBP1P17861 261 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 SFPQP23246 707 aaKnown RBP eCLIP20.15■□□□□ 0.82
ATG4B-221ENST00000483778 YWHABP31946 246 aaKnown RBP20.15■□□□□ 0.82
ATG4B-221ENST00000483778 PPM1AP35813 382 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 CBX2Q14781 532 aaPredicted RBP20.15■□□□□ 0.82
ATG4B-221ENST00000483778 TPH2Q8IWU9 490 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 EDAQ92838 391 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 GTF3C6Q969F1 213 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 PHF7Q9BWX1 381 aaPredicted RBP20.15■□□□□ 0.82
ATG4B-221ENST00000483778 VN1R3Q9BXE9 311 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 XPNPEP1Q9NQW7 623 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 PCDHB2Q9Y5E7 798 aa20.15■□□□□ 0.82
ATG4B-221ENST00000483778 MARCH6O60337 910 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 CLASP2O75122 1294 aaKnown RBP20.14■□□□□ 0.81
ATG4B-221ENST00000483778 ZC3H11AO75152 810 aaKnown RBP eCLIP20.14■□□□□ 0.81
ATG4B-221ENST00000483778 GALTP07902 379 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 KRT2P35908 639 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 ALDH7A1P49419 539 aaKnown RBP20.14■□□□□ 0.81
ATG4B-221ENST00000483778 POLGP54098 1239 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-221ENST00000483778 XKR9Q5GH70 373 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 NOMO2Q5JPE7 1267 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 SLC7A3Q8WY07 619 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 INO80BQ9C086 356 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-221ENST00000483778 GBP3Q9H0R5 595 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 AGPAT5Q9NUQ2 364 aa20.14■□□□□ 0.81
ATG4B-221ENST00000483778 DDHD2O94830 711 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 SP100P23497 879 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 SLC11A1P49279 550 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 NEK4P51957 841 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 EMC2Q15006 297 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 ANKRD1Q15327 319 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 MRPL10Q7Z7H8 261 aaKnown RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 FERMT3Q86UX7 667 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 VPS52Q8N1B4 723 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 C12orf76Q8N812 135 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 PSPC1Q8WXF1 523 aaKnown RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 HSD17B14Q9BPX1 270 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 EIF2AK1Q9BQI3 630 aaKnown RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 JPH2Q9BR39 696 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 HCFC2Q9Y5Z7 792 aa20.13■□□□□ 0.81
ATG4B-221ENST00000483778 TDRD15B5MCY1 1934 aaKnown RBP20.13■□□□□ 0.81
ATG4B-221ENST00000483778 WEE2P0C1S8 567 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 RFC5P40937 340 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 SMC1AQ14683 1233 aaKnown RBP20.12■□□□□ 0.81
ATG4B-221ENST00000483778 GLB1LQ6UWU2 654 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 SRGAP1Q7Z6B7 1085 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 RNF149Q8NC42 400 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 IGSF21Q96ID5 467 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 MRPL9Q9BYD2 267 aaKnown RBP20.12■□□□□ 0.81
ATG4B-221ENST00000483778 ZBP1Q9H171 429 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 RNF39Q9H2S5 420 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 ZSWIM4Q9H7M6 989 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 ZDBF2Q9HCK1 2354 aa20.12■□□□□ 0.81
ATG4B-221ENST00000483778 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.81
ATG4B-221ENST00000483778 BAG4O95429 457 aaKnown RBP20.11■□□□□ 0.81
ATG4B-221ENST00000483778 ZXDAP98168 799 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 OTUD6AQ7L8S5 288 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 SLFN12Q8IYM2 578 aa20.11■□□□□ 0.81
ATG4B-221ENST00000483778 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
ATG4B-221ENST00000483778 WASF1Q92558 559 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms