RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TRIM49BA6NDI0 452 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 K7ENM7 598 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 SLC16A4O15374 487 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 SMIM10L2AP0DMW4 78 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 SMIM10L2BP0DMW5 78 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
MRPL28-210ENST00000483764 PBX1P40424 430 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 DNM2P50570 870 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 NCKAP1LP55160 1127 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-210ENST00000483764 ALCAMQ13740 583 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 KNOP1Q1ED39 458 aaKnown RBP18.84■□□□□ 0.61
MRPL28-210ENST00000483764 EFCAB12Q6NXP0 572 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 TTI2Q6NXR4 508 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 HAUS6Q7Z4H7 955 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 KMT5AQ9NQR1 393 aa18.84■□□□□ 0.61
MRPL28-210ENST00000483764 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
MRPL28-210ENST00000483764 NRCAMQ92823 1304 aa18.83■□□□□ 0.61
MRPL28-210ENST00000483764 USP27XA6NNY8 438 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 PPP1R37O75864 691 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 GLRA2P23416 452 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 CST5P28325 142 aaPredicted RBP18.83■□□□□ 0.6
MRPL28-210ENST00000483764 HOXD13P35453 343 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 LRRC63Q05C16 580 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 DRP2Q13474 957 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 PPP2R5AQ15172 486 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 MTHFD1LQ6UB35 978 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 CXCL17Q6UXB2 119 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 APTXQ7Z2E3 356 aaKnown RBP18.83■□□□□ 0.6
MRPL28-210ENST00000483764 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 METTL13Q8N6R0 699 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 TC2NQ8N9U0 490 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 ASAP3Q8TDY4 903 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 PRPF31Q8WWY3 499 aaKnown RBP18.83■□□□□ 0.6
MRPL28-210ENST00000483764 KCTD10Q9H3F6 313 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 THAP9Q9H5L6 903 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 SETD4Q9NVD3 440 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 TRMT1Q9NXH9 659 aaKnown RBP18.83■□□□□ 0.6
MRPL28-210ENST00000483764 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.6
MRPL28-210ENST00000483764 UBE4BO95155 1302 aa18.83■□□□□ 0.6
MRPL28-210ENST00000483764 SLU7O95391 586 aaKnown RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 MYCNP04198 464 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 HSPA8P11142 646 aaKnown RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 FECHP22830 423 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 GTF2BQ00403 316 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 KCNA1Q09470 495 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 MXD4Q14582 209 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 KCNA10Q16322 511 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 MARCH8Q5T0T0 291 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 LHX8Q68G74 356 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 CCSAPQ6IQ19 270 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 RNF180Q86T96 592 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 TMEM139Q8IV31 216 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 TMEM161BQ8NDZ6 487 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 PSPC1Q8WXF1 523 aaKnown RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 ZBTB10Q96DT7 871 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 TSG101Q99816 390 aa18.82■□□□□ 0.6
MRPL28-210ENST00000483764 DUSP9Q99956 384 aaKnown RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 SUCLA2Q9P2R7 463 aaPredicted RBP18.82■□□□□ 0.6
MRPL28-210ENST00000483764 HTTP42858 3142 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 H0YCG3 227 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 ASGR1P07306 291 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 NAMPTP43490 491 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 TUBB2AQ13885 445 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 SLC9C1Q4G0N8 1177 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 CSGALNACT2Q8N6G5 542 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 LMBR1Q8WVP7 490 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 ZNF592Q92610 1267 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 TUBB2BQ9BVA1 445 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 KIFC3Q9BVG8 833 aa18.81■□□□□ 0.6
MRPL28-210ENST00000483764 PDXKO00764 312 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 SCP2P22307 547 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 TMOD1P28289 359 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 CLCN3P51790 818 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 LAMTOR4Q0VGL1 99 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 LINC01465Q8N7H1 131 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 PPP1R13LQ8WUF5 828 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 ACCSQ96QU6 501 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.8■□□□□ 0.6
MRPL28-210ENST00000483764 PPP2R2CQ9Y2T4 447 aa18.8■□□□□ 0.6
MRPL28-210ENST00000483764 A0A1W2PQC6 194 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 DENND3A2RUS2 1198 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 LRRIQ4A6NIV6 560 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 ASAP2O43150 1006 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 ABCD1P33897 745 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 TUBB4BP68371 445 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
MRPL28-210ENST00000483764 CAPSQ13938 189 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 TCP11X2Q5H9J9 407 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
MRPL28-210ENST00000483764 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms