RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SLC5A4Q9NY91 659 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 HSPBP1Q9NZL4 362 aa15.36■□□□□ 0.05
CLK3-204ENST00000483723 EPN1Q9Y6I3 576 aaPredicted RBP15.36■□□□□ 0.05
CLK3-204ENST00000483723 TISP43B9A030 160 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
CLK3-204ENST00000483723 CCDC175P0C221 793 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 HSPA6P17066 643 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 TM4SF4P48230 202 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 MAP2K5Q13163 448 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 IER5Q5VY09 327 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 IQSEC1Q6DN90 963 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 SLC39A4Q6P5W5 647 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 PDXDC1Q6P996 788 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 FBXL18Q96ME1 805 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
CLK3-204ENST00000483723 NUCKS1Q9H1E3 243 aaKnown RBP15.35■□□□□ 0.05
CLK3-204ENST00000483723 TMEM134Q9H6X4 195 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 FBXL5Q9UKA1 691 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 DOCK3Q8IZD9 2030 aa15.35■□□□□ 0.05
CLK3-204ENST00000483723 HBP1O60381 514 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 PIGRP01833 764 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 HOXD8P13378 290 aaPredicted RBP15.34■□□□□ 0.05
CLK3-204ENST00000483723 PON1P27169 355 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 ADCYAP1R1P41586 468 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 ENPEPQ07075 957 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 BFSP1Q12934 665 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 ACVR2BQ13705 512 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 DUSP28Q4G0W2 176 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 GBP6Q6ZN66 633 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
CLK3-204ENST00000483723 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 PPTC7Q8NI37 304 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 CRACR2AQ9BSW2 395 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 ZNHIT6Q9NWK9 470 aaKnown RBP15.34■□□□□ 0.05
CLK3-204ENST00000483723 PMM2O15305 246 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 IGHA2P01877 340 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 SLC9A1P19634 815 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 GARTP22102 1010 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 FMO5P49326 533 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
CLK3-204ENST00000483723 EXOC3L4Q17RC7 722 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 DCAF17Q5H9S7 520 aaPredicted RBP15.34■□□□□ 0.05
CLK3-204ENST00000483723 KLHDC7AQ5VTJ3 777 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 TRIM50Q86XT4 487 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 DESI2Q9BSY9 194 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 SIX2Q9NPC8 291 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 STYXL1Q9Y6J8 313 aa15.34■□□□□ 0.05
CLK3-204ENST00000483723 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 NDUFA10O95299 355 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 SMPD1P17405 629 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 C1orf220Q5T0J3 134 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 GJC2Q5T442 439 aaPredicted RBP15.33■□□□□ 0.04
CLK3-204ENST00000483723 TCERG1LQ5VWI1 586 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 RRAGAQ7L523 313 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 TCP11Q8WWU5 503 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
CLK3-204ENST00000483723 ZFYVE28Q9HCC9 887 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 ERAP1Q9NZ08 941 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 MYO6Q9UM54 1294 aa15.33■□□□□ 0.04
CLK3-204ENST00000483723 R3HCC1Q9Y3T6 440 aaKnown RBP15.33■□□□□ 0.04
CLK3-204ENST00000483723 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.32■□□□□ 0.04
CLK3-204ENST00000483723 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 P4HA2O15460 535 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 LGALS2P05162 132 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 KRT13P13646 458 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 MARK3P27448 753 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 VAMP7P51809 220 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
CLK3-204ENST00000483723 ETF1P62495 437 aaKnown RBP15.32■□□□□ 0.04
CLK3-204ENST00000483723 SREBF2Q12772 1141 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 ZNF484Q5JVG2 852 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 ZNF662Q6ZS27 426 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 CACNA2D4Q7Z3S7 1137 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 ZSWIM2Q8NEG5 633 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 MFSD14AQ96MC6 490 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 RNPEPQ9H4A4 650 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 NHEJ1Q9H9Q4 299 aaPredicted RBP15.32■□□□□ 0.04
CLK3-204ENST00000483723 AIPL1Q9NZN9 384 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 REXO2Q9Y3B8 237 aaKnown RBP15.32■□□□□ 0.04
CLK3-204ENST00000483723 PAXBP1Q9Y5B6 917 aa15.32■□□□□ 0.04
CLK3-204ENST00000483723 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
CLK3-204ENST00000483723 ADCY3O60266 1144 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
CLK3-204ENST00000483723 DRP2Q13474 957 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 CAPSQ13938 189 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 HGSNATQ68CP4 663 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 DEPTORQ8TB45 409 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 PRPF31Q8WWY3 499 aaKnown RBP15.31■□□□□ 0.04
CLK3-204ENST00000483723 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
CLK3-204ENST00000483723 C16orf70Q9BSU1 422 aa15.31■□□□□ 0.04
CLK3-204ENST00000483723 NLRC4Q9NPP4 1024 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms