RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 LINC00301Q8NCQ3 95 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 MYLIPQ8WY64 445 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 ARNTL2Q8WYA1 636 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 CCDC51Q96ER9 411 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 DRC1Q96MC2 740 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 CSRNP2Q9H175 543 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 MINDY3Q9H8M7 445 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 C17orf75Q9HAS0 396 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 CCDC39Q9UFE4 941 aa28.59■■■□□ 2.17
PDCD4-208ENST00000483670 PPP6R2O75170 966 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 ARHGEF15O94989 841 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 GUCY2CP25092 1073 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 GRIN1Q05586 938 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 CDCA2Q69YH5 1023 aaPredicted RBP28.58■■■□□ 2.17
PDCD4-208ENST00000483670 ECHDC2Q86YB7 292 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 PRIMPOLQ96LW4 560 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 CFAP45Q9UL16 551 aa28.58■■■□□ 2.17
PDCD4-208ENST00000483670 PLA2G4BP0C869 781 aa28.57■■■□□ 2.16
PDCD4-208ENST00000483670 MBTD1Q05BQ5 628 aa28.57■■■□□ 2.16
PDCD4-208ENST00000483670 C1orf186Q6ZWK4 172 aa28.57■■■□□ 2.16
PDCD4-208ENST00000483670 PRMT7Q9NVM4 692 aaPredicted RBP28.57■■■□□ 2.16
PDCD4-208ENST00000483670 NLRC5Q86WI3 1866 aa28.57■■■□□ 2.16
PDCD4-208ENST00000483670 SPTLC2O15270 562 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 SSBP05455 408 aaKnown RBP eCLIP28.56■■■□□ 2.16
PDCD4-208ENST00000483670 SLC12A3P55017 1021 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 FOXD4L5Q5VV16 416 aaPredicted RBP28.56■■■□□ 2.16
PDCD4-208ENST00000483670 NOTUMQ6P988 496 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 PHLPP2Q6ZVD8 1323 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 DEPTORQ8TB45 409 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 FOXD4L4Q8WXT5 416 aaPredicted RBP28.56■■■□□ 2.16
PDCD4-208ENST00000483670 CLP1Q92989 425 aaKnown RBP28.56■■■□□ 2.16
PDCD4-208ENST00000483670 PLIN2Q99541 437 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 CERS4Q9HA82 394 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 FAM105AQ9NUU6 356 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 CHD7Q9P2D1 2997 aa28.56■■■□□ 2.16
PDCD4-208ENST00000483670 FNDC1Q4ZHG4 1894 aaPredicted RBP28.55■■■□□ 2.16
PDCD4-208ENST00000483670 ZNF623O75123 536 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 IBSPP21815 317 aaPredicted RBP28.55■■■□□ 2.16
PDCD4-208ENST00000483670 EFNA5P52803 228 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 PKP1Q13835 747 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 KARSQ15046 597 aaKnown RBP28.55■■■□□ 2.16
PDCD4-208ENST00000483670 PPP4R3CPQ6ZMV5 832 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 ABI1Q8IZP0 508 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 CNNM3Q8NE01 707 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 TMEM117Q9H0C3 514 aa28.55■■■□□ 2.16
PDCD4-208ENST00000483670 TSPAN1O60635 241 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 BRD1O95696 1058 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 RB1P06400 928 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 PLCG1P19174 1290 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 POU3F3P20264 500 aaPredicted RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 HOXA11P31270 313 aaPredicted RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 DMP1Q13316 513 aaPredicted RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 FAM187BQ17R55 369 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 ZNF598Q86UK7 904 aaKnown RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 TMEM192Q8IY95 271 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 FBXO22Q8NEZ5 403 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 KCNG4Q8TDN1 519 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 SYMPKQ92797 1274 aaKnown RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 PGBD4Q96DM1 585 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 RUSC1Q9BVN2 902 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 TFIP11Q9UBB9 837 aaKnown RBP28.54■■■□□ 2.16
PDCD4-208ENST00000483670 STK17AQ9UEE5 414 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 ATP6V1DQ9Y5K8 247 aa28.54■■■□□ 2.16
PDCD4-208ENST00000483670 GTPBP6O43824 516 aaPredicted RBP28.53■■■□□ 2.16
PDCD4-208ENST00000483670 HIP1RO75146 1068 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 MAPK6Q16659 721 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 EPC2Q52LR7 807 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 BSNDQ8WZ55 320 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 EPSTI1Q96J88 318 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 CLIC6Q96NY7 704 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 C17orf80Q9BSJ5 609 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 PLVAPQ9BX97 442 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 LMCD1Q9NZU5 365 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 MTUS1Q9ULD2 1270 aa28.53■■■□□ 2.16
PDCD4-208ENST00000483670 MYH11P35749 1972 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 TBKBP1A7MCY6 615 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 C5orf67F2Z3F1 127 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 DDIT3P35638 169 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 AMHR2Q16671 573 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 RNF169Q8NCN4 708 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 LARP4BQ92615 738 aaKnown RBP28.52■■■□□ 2.16
PDCD4-208ENST00000483670 RAD54LQ92698 747 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 FZD8Q9H461 694 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 AAASQ9NRG9 546 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 ODF2LQ9ULJ1 636 aa28.52■■■□□ 2.16
PDCD4-208ENST00000483670 RBM19Q9Y4C8 960 aaKnown RBP28.52■■■□□ 2.16
PDCD4-208ENST00000483670 BMPR1AP36894 532 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 NAALADL2Q58DX5 795 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 SPECC1Q5M775 1068 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 CCDC73Q6ZRK6 1079 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 C11orf84Q9BUA3 381 aaPredicted RBP28.51■■■□□ 2.15
PDCD4-208ENST00000483670 MRPL9Q9BYD2 267 aaKnown RBP28.51■■■□□ 2.15
PDCD4-208ENST00000483670 BLOC1S4Q9NUP1 217 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 PCDHB2Q9Y5E7 798 aa28.51■■■□□ 2.15
PDCD4-208ENST00000483670 MRPL42Q9Y6G3 142 aaKnown RBP28.51■■■□□ 2.15
PDCD4-208ENST00000483670 CNTNAP2Q9UHC6 1331 aa28.5■■■□□ 2.15
PDCD4-208ENST00000483670 CUTAO60888 179 aa28.5■■■□□ 2.15
PDCD4-208ENST00000483670 FGFR1P11362 822 aa28.5■■■□□ 2.15
PDCD4-208ENST00000483670 ARF4P18085 180 aaPredicted RBP28.5■■■□□ 2.15
PDCD4-208ENST00000483670 IGFBP4P22692 258 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms