RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FIBPO43427 364 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 SASH3O75995 380 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 ALADP13716 330 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 CES1P23141 567 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 TARSP26639 723 aaKnown RBP6.75□□□□□ -1.33
CSDE1-207ENST00000483407 HOXC8P31273 242 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 ICAM3P32942 547 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 GPM6BQ13491 265 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 WTAPQ15007 396 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 DBN1Q16643 649 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 RIPOR1Q6ZS17 1223 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 EP400NLQ6ZTU2 488 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 CYB5R4Q7L1T6 521 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 CYFIP1Q7L576 1253 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 CATIPQ7Z7H3 387 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 FAM178BQ8IXR5 827 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 TRIM22Q8IYM9 498 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 OR13H1Q8NG92 308 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-207ENST00000483407 RUFY2Q8WXA3 655 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 GPR20Q99678 358 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 IFIH1Q9BYX4 1025 aaKnown RBP6.75□□□□□ -1.33
CSDE1-207ENST00000483407 RNPEPQ9H4A4 650 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 HCN2Q9UL51 889 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 SCN5AQ14524 2016 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 NRCAMQ92823 1304 aa6.75□□□□□ -1.33
CSDE1-207ENST00000483407 NCOR1O75376 2440 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 FAM86C2PA6NEL3 165 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 PRR33A8MZF0 331 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 H3BQ06 376 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 KHNYNO15037 678 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NCK2O43639 380 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 BNIP3LO60238 219 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 IGHDP01880 384 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 MAPTP10636 758 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 IL9P15248 144 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 MRPS9P82933 396 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SP4Q02446 784 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NAALADL2Q58DX5 795 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 TCEAL5Q5H9L2 206 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 UTP14CQ5TAP6 766 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 KIAA0319Q5VV43 1072 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 TAF2Q6P1X5 1199 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 XRRA1Q6P2D8 792 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 RSPH3Q86UC2 560 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NLRX1Q86UT6 975 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 TMEM192Q8IY95 271 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 FIBCD1Q8N539 461 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 GIMAP8Q8ND71 665 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SMARCC2Q8TAQ2 1214 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NEK9Q8TD19 979 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 LMBR1Q8WVP7 490 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 PABPC5Q96DU9 382 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 IL17RAQ96F46 866 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 INPP4AQ96PE3 977 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SENP7Q9BQF6 1050 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 C11orf84Q9BUA3 381 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 BCO2Q9BYV7 579 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 TGIF2Q9GZN2 237 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SUV39H2Q9H5I1 410 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 NSUN3Q9H649 340 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SENP2Q9HC62 589 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 CD320Q9NPF0 282 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SETD4Q9NVD3 440 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 RTEL1Q9NZ71 1219 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 ZFATQ9P243 1243 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 SEC63Q9UGP8 760 aaKnown RBP6.74□□□□□ -1.33
CSDE1-207ENST00000483407 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
CSDE1-207ENST00000483407 TCF20Q9UGU0 1960 aaKnown RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 TET1Q8NFU7 2136 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 DCXO43602 365 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CYTH3O43739 400 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 MMP20O60882 483 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 RPLP2P05387 115 aaKnown RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 RB1P06400 928 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CYP21A2P08686 494 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 KIF5BP33176 963 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CTNNB1P35222 781 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 GNAQP50148 359 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 TROAPQ12815 778 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 GRM2Q14416 872 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 SLC35G1Q2M3R5 365 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 PCNX4Q63HM2 1172 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 NXPE4Q6UWF7 544 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 RPAINQ86UA6 219 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CTCFLQ8NI51 663 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 PIBF1Q8WXW3 757 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 TNPO1Q92973 898 aaKnown RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 RRP36Q96EU6 259 aaKnown RBP6.73□□□□□ -1.33
CSDE1-207ENST00000483407 CDHR1Q96JP9 859 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 UIMC1Q96RL1 719 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 LZTS2Q9BRK4 669 aa6.73□□□□□ -1.33
CSDE1-207ENST00000483407 UPF3BQ9BZI7 483 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms