RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 TTLL13PA6NNM8 815 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 PP2D1A8MPX8 630 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 FSCN2O14926 492 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 DKC1O60832 514 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDLBP-239ENST00000483086 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDLBP-239ENST00000483086 MBTD1Q05BQ5 628 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 CLUL1Q15846 466 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 KCNT2Q6UVM3 1135 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 AGMOQ6ZNB7 445 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
HDLBP-239ENST00000483086 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 CPB2Q96IY4 423 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
HDLBP-239ENST00000483086 IGFLR1Q9H665 355 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 CHST12Q9NRB3 414 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 ANKEF1Q9NU02 776 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 CLEC1BQ9P126 229 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 PPME1Q9Y570 386 aa13.46□□□□□ -0.25
HDLBP-239ENST00000483086 GRXCR2A6NFK2 248 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 PER2O15055 1255 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 B4GALT5O43286 388 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 TSPAN1O60635 241 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 OFD1O75665 1012 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 EOMESO95936 686 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 GJB2P29033 226 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 CDC25AP30304 524 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 PTENP60484 403 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 ADAM15Q13444 863 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 FAM43BQ6ZT52 329 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 MAEAQ7L5Y9 396 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 CDR2LQ86X02 465 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 POLR3CQ9BUI4 534 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 VN1R3Q9BXE9 311 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-239ENST00000483086 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 TUFT1Q9NNX1 390 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 DNAJB4Q9UDY4 337 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
HDLBP-239ENST00000483086 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 HIDE1A8MVS5 230 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 ZNF623O75123 536 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 DGAT1O75907 488 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 LAG3P18627 525 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 RPA1P27694 616 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 NRIP1P48552 1158 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.262e-11■■□□□ 11.9
HDLBP-239ENST00000483086 CDC42EP1Q00587 391 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 PTGDRQ13258 359 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-239ENST00000483086 EP400NLQ6ZTU2 488 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 KCNK18Q7Z418 384 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
HDLBP-239ENST00000483086 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 THNSL1Q8IYQ7 743 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 SLC39A11Q8N1S5 342 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 MSLNLQ96KJ4 702 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
HDLBP-239ENST00000483086 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 HES2Q9Y543 173 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 PCDHB2Q9Y5E7 798 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 PCDHB12Q9Y5F1 795 aa13.44□□□□□ -0.26
HDLBP-239ENST00000483086 GAS2O43903 313 aaKnown RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 ST18O60284 1047 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 DDHD2O94830 711 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 ARF4P18085 180 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 BCAR1P56945 870 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 KCNC3Q14003 757 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 PLPP4Q5VZY2 271 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 IGSF22Q8N9C0 903 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 LRRC15Q8TF66 581 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 MRPS27Q92552 414 aaKnown RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 CXCL16Q9H2A7 254 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
HDLBP-239ENST00000483086 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
HDLBP-239ENST00000483086 BARX2Q9UMQ3 279 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms