RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TCEAL5Q5H9L2 206 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 IGSF22Q8N9C0 903 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 ASAP3Q8TDY4 903 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 SNX29Q8TEQ0 813 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 PPP2R3CQ969Q6 453 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 MRPL9Q9BYD2 267 aaKnown RBP15.42■□□□□ 0.06
VARS-225ENST00000482996 POLR3FQ9H1D9 316 aaPredicted RBP15.42■□□□□ 0.06
VARS-225ENST00000482996 UBE2ZQ9H832 354 aaPredicted RBP15.42■□□□□ 0.06
VARS-225ENST00000482996 MINDY3Q9H8M7 445 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 RNF19AQ9NV58 838 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 FNDC1Q4ZHG4 1894 aaPredicted RBP15.42■□□□□ 0.06
VARS-225ENST00000482996 SPTBN5Q9NRC6 3674 aaKnown RBP15.41■□□□□ 0.06
VARS-225ENST00000482996 VCANP13611 3396 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 INO80B-WBP1J3KQ70 363 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 NCK2O43639 380 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 ZNF623O75123 536 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
VARS-225ENST00000482996 PDCP20941 246 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 GLRA2P23416 452 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 AXLP30530 894 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 UBE3AQ05086 875 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 CAPSQ13938 189 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 CLLU1OSQ5K130 101 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 KRT79Q5XKE5 535 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 GLB1LQ6UWU2 654 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 MAEAQ7L5Y9 396 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 IFNLR1Q8IU57 520 aaPredicted RBP15.41■□□□□ 0.06
VARS-225ENST00000482996 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 COLGALT1Q8NBJ5 622 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 SPPL3Q8TCT6 385 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 HELQQ8TDG4 1101 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 PGBD4Q96DM1 585 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 CWH43Q9H720 699 aa15.41■□□□□ 0.06
VARS-225ENST00000482996 CSPG5O95196 566 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 PPM1AP35813 382 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 ATP2C1P98194 919 aaPredicted RBP15.4■□□□□ 0.06
VARS-225ENST00000482996 BRAPQ7Z569 592 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 POF1BQ8WVV4 589 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 CCDC51Q96ER9 411 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 ZNF558Q96NG5 402 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 HCSTQ9UBK5 93 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 KIAA1024Q9UPX6 916 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 PCDHB2Q9Y5E7 798 aa15.4■□□□□ 0.06
VARS-225ENST00000482996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.39■□□□□ 0.05
VARS-225ENST00000482996 CARNS1A5YM72 827 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 LRRIQ4A6NIV6 560 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 FGF18O76093 207 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 CYP11B2P19099 503 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 HOXA11P31270 313 aaPredicted RBP15.39■□□□□ 0.05
VARS-225ENST00000482996 NOTUMQ6P988 496 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 KCNT2Q6UVM3 1135 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 EP400NLQ6ZTU2 488 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 ZBTB8OSQ8IWT0 167 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 CNNM3Q8NE01 707 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 ADAMTS19Q8TE59 1207 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 LPPQ93052 612 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 PABPC5Q96DU9 382 aaKnown RBP15.39■□□□□ 0.05
VARS-225ENST00000482996 GPRC5CQ9NQ84 441 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
VARS-225ENST00000482996 PUF60Q9UHX1 559 aaKnown RBP15.39■□□□□ 0.05
VARS-225ENST00000482996 DNM3Q9UQ16 869 aa15.39■□□□□ 0.05
VARS-225ENST00000482996 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 VPS37CA5D8V6 355 aaPredicted RBP15.38■□□□□ 0.05
VARS-225ENST00000482996 TSPAN1O60635 241 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 BMP15O95972 392 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 BMP1P13497 986 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 KCNA5P22460 613 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 DNAJB1P25685 340 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 KCNQ1P51787 676 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 MBTD1Q05BQ5 628 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 CAMK1Q14012 370 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 ECM1Q16610 540 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 LONRF3Q496Y0 759 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 NOMO2Q5JPE7 1267 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 ARL6IP4Q66PJ3 421 aaKnown RBP15.38■□□□□ 0.05
VARS-225ENST00000482996 MRPL10Q7Z7H8 261 aaKnown RBP15.38■□□□□ 0.05
VARS-225ENST00000482996 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
VARS-225ENST00000482996 C2orf40Q9H1Z8 148 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 BHMT2Q9H2M3 363 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 TLR9Q9NR96 1032 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 SPG21Q9NZD8 308 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 INPP5FQ9Y2H2 1132 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 XIRP2A4UGR9 3374 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 BDP1A6H8Y1 2624 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 CNTNAP2Q9UHC6 1331 aa15.38■□□□□ 0.05
VARS-225ENST00000482996 PP2D1A8MPX8 630 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 EYA4O95677 639 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 KRT17Q04695 432 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 RNASELQ05823 741 aaKnown RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 HYAL1Q12794 435 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms