RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 AUTS2Q8WXX7 1259 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 TMEM143Q96AN5 459 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
EPHB3-203ENST00000482987 NRDE2Q9H7Z3 1164 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
EPHB3-203ENST00000482987 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 TBC1D13Q9NVG8 400 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 RGL1Q9NZL6 768 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 MYH9P35579 1960 aaKnown RBP12.88□□□□□ -0.35
EPHB3-203ENST00000482987 TECTAO75443 2155 aa12.88□□□□□ -0.35
EPHB3-203ENST00000482987 TMEM221A6NGB7 291 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 M0R296 226 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 ZNF623O75123 536 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 OFD1O75665 1012 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 LARGE1O95461 756 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 GALTP07902 379 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 SRGAP2BP0DMP2 458 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 HOXB8P17481 243 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 HOXA11P31270 313 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 NHLH1Q02575 133 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 NR5A1Q13285 461 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 BMP8AQ7Z5Y6 402 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 ALYREFQ86V81 257 aaKnown RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 PRPF31Q8WWY3 499 aaKnown RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 IGSF21Q96ID5 467 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 LXNQ9BS40 222 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 VN1R3Q9BXE9 311 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 ORC3Q9UBD5 711 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-203ENST00000482987 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
EPHB3-203ENST00000482987 WNT7AO00755 349 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 TBX3O15119 743 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 CXCL14O95715 111 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
EPHB3-203ENST00000482987 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-203ENST00000482987 AK2P54819 239 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 CTTNQ14247 550 aaKnown RBP12.86□□□□□ -0.35
EPHB3-203ENST00000482987 EPHA7Q15375 998 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 IER5LQ5T953 404 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 ZNF280BQ86YH2 543 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
EPHB3-203ENST00000482987 CASP10Q92851 521 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 ASIC4Q96FT7 647 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 TMEM169Q96HH4 297 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 DYDC2Q96IM9 177 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 MFSD14AQ96MC6 490 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-203ENST00000482987 KCNH6Q9H252 994 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 POMKQ9H5K3 350 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 PCDHB2Q9Y5E7 798 aa12.86□□□□□ -0.35
EPHB3-203ENST00000482987 USP34Q70CQ2 3546 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-203ENST00000482987 WEE2P0C1S8 567 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 CTSAP10619 480 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 SKIP12755 728 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 XBP1P17861 261 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 RFC5P40937 340 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 SLC11A1P49279 550 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 RAB27AP51159 221 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 EMC2Q15006 297 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 MRPL10Q7Z7H8 261 aaKnown RBP12.85□□□□□ -0.35
EPHB3-203ENST00000482987 DDX53Q86TM3 631 aaKnown RBP12.85□□□□□ -0.35
EPHB3-203ENST00000482987 C12orf76Q8N812 135 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-203ENST00000482987 PRSS33Q8NF86 280 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 RSPH1Q8WYR4 309 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 PBXIP1Q96AQ6 731 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
EPHB3-203ENST00000482987 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
EPHB3-203ENST00000482987 DDHD2O94830 711 aa12.84□□□□□ -0.35
EPHB3-203ENST00000482987 SLITRK3O94933 977 aa12.84□□□□□ -0.35
EPHB3-203ENST00000482987 EPCAMP16422 314 aa12.84□□□□□ -0.35
EPHB3-203ENST00000482987 CA8P35219 290 aa12.84□□□□□ -0.35
EPHB3-203ENST00000482987 ANAPC15P60006 121 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms