RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 DNAJB1P25685 340 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 IRS1P35568 1242 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 NDUFV1P49821 464 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 UBE3AQ05086 875 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 HYAL1Q12794 435 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 CAPSQ13938 189 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 CLUL1Q15846 466 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 LEXMQ3ZCV2 418 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-212ENST00000482478 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 MAEAQ7L5Y9 396 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 ZNF598Q86UK7 904 aaKnown RBP17.44■□□□□ 0.38
COL16A1-212ENST00000482478 SPPL3Q8TCT6 385 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 ASAP3Q8TDY4 903 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 CWH43Q9H720 699 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 MINDY3Q9H8M7 445 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 ENTPD7Q9NQZ7 604 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 SMC3Q9UQE7 1217 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
COL16A1-212ENST00000482478 TCF20Q9UGU0 1960 aaKnown RBP17.44■□□□□ 0.38
COL16A1-212ENST00000482478 A0A087WWV3 80 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 ARHGEF35A5YM69 484 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 ASAP2O43150 1006 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 NCK2O43639 380 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 EOMESO95936 686 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL16A1-212ENST00000482478 CA8P35219 290 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 CCT6AP40227 531 aaKnown RBP17.43■□□□□ 0.38
COL16A1-212ENST00000482478 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 ADGRD2Q7Z7M1 963 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 CATSPER3Q86XQ3 398 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 MCPH1Q8NEM0 835 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 URGCPQ8TCY9 931 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 SNX29Q8TEQ0 813 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 PGBD4Q96DM1 585 aa17.43■□□□□ 0.38
COL16A1-212ENST00000482478 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-212ENST00000482478 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-212ENST00000482478 TSPAN1O60635 241 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 TBX10O75333 385 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 SPATA31C1P0DKV0 1188 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 IL9P15248 144 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 GTF2F1P35269 517 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL16A1-212ENST00000482478 NRIP1P48552 1158 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL16A1-212ENST00000482478 RNASELQ05823 741 aaKnown RBP17.42■□□□□ 0.38
COL16A1-212ENST00000482478 CAMK1Q14012 370 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 KCNT2Q6UVM3 1135 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 RBM23Q86U06 439 aaKnown RBP17.42■□□□□ 0.38
COL16A1-212ENST00000482478 RSPH1Q8WYR4 309 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 NACC1Q96RE7 527 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 TCF25Q9BQ70 676 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 TRAIPQ9BWF2 469 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 GBP3Q9H0R5 595 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 FAM50BQ9Y247 325 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 PCDHB6Q9Y5E3 794 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 PCDHB2Q9Y5E7 798 aa17.42■□□□□ 0.38
COL16A1-212ENST00000482478 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 GLRA2P23416 452 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 PTENP60484 403 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 MBTD1Q05BQ5 628 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 PTGDRQ13258 359 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 PUS10Q3MIT2 529 aaKnown RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 TRIM6Q9C030 488 aaPredicted RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 RSAD1Q9HA92 442 aa17.41■□□□□ 0.38
COL16A1-212ENST00000482478 PUF60Q9UHX1 559 aaKnown RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 DBR1Q9UK59 544 aaKnown RBP17.41■□□□□ 0.38
COL16A1-212ENST00000482478 MEIS3P2A8K0S8 358 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 LAD1O00515 517 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 LINC01565O15544 149 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 RPA1P27694 616 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-212ENST00000482478 KRT17Q04695 432 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 PCBP1Q15365 356 aaKnown RBP eCLIP17.4■□□□□ 0.38
COL16A1-212ENST00000482478 RILPL1Q5EBL4 403 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 NOMO2Q5JPE7 1267 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-212ENST00000482478 CCDC51Q96ER9 411 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 TMEM169Q96HH4 297 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 APOL6Q9BWW8 343 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 TBC1D13Q9NVG8 400 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 SPG21Q9NZD8 308 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 CNTNAP2Q9UHC6 1331 aa17.4■□□□□ 0.38
COL16A1-212ENST00000482478 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 SRGAP2BP0DMP2 458 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 ARL2P36404 184 aa17.39■□□□□ 0.37
COL16A1-212ENST00000482478 ALDH7A1P49419 539 aaKnown RBP17.39■□□□□ 0.37
COL16A1-212ENST00000482478 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms