RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 DISP2A7MBM2 1401 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 PPP1R12AO14974 1030 aaPredicted RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 KIF3BO15066 747 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 DNAJC8O75937 253 aaPredicted RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 FBXO21O94952 628 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 NPTXRO95502 500 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 HSPA6P17066 643 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 AOAHP28039 575 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 CSF2RBP32927 897 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 MECP2P51608 486 aaKnown RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 HERVK_113P62684 666 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 TUBA3CQ13748 450 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 NOLC1Q14978 699 aaKnown RBP eCLIP3.22□□□□□ -1.89
USH2A-204ENST00000481786 TM4SF20Q53R12 229 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 TMEM177Q53S58 311 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 TUBA3EQ6PEY2 450 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 EP400NLQ6ZTU2 488 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 Q6ZUG5 572 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 OTOP1Q7RTM1 612 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 KRT27Q7Z3Y8 459 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 IGSF22Q8N9C0 903 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 DLG3Q92796 817 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 NEIL1Q96FI4 390 aaPredicted RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 RNPC3Q96LT9 517 aaKnown RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 TACO1Q9BSH4 297 aaKnown RBP3.22□□□□□ -1.89
USH2A-204ENST00000481786 SLC2A4RGQ9NR83 387 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 TMEM260Q9NX78 707 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 CAMSAP2Q08AD1 1489 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 PLEKHH2Q8IVE3 1493 aa3.22□□□□□ -1.89
USH2A-204ENST00000481786 MAST1Q9Y2H9 1570 aa3.21□□□□□ -1.89
USH2A-204ENST00000481786 TET3O43151 1660 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 DCCP43146 1447 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ASXL1Q8IXJ9 1541 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 SLC12A8A0AV02 714 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ESYT3A0FGR9 886 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 FAM83GA6ND36 823 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 PRAMEF25A6NGN4 478 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 H0Y858 1186 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 SCDO00767 359 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 RAMP2O60895 175 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 MPIG6BO95866 241 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 APPP05067 770 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ZNF888P0CJ79 500 aaPredicted RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 ZBTB48P10074 688 aaPredicted RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 PTGS1P23219 599 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 HNRNPMP52272 730 aaKnown RBP eCLIP3.21□□□□□ -1.9
USH2A-204ENST00000481786 FSTL1Q12841 308 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ZCCHC8Q6NZY4 707 aaKnown RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 ZNF808Q8N4W9 903 aaPredicted RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 GPR150Q8NGU9 434 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ZNF483Q8TF39 744 aaPredicted RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 AJUBAQ96IF1 538 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 KATNBL1Q9H079 304 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 INCENPQ9NQS7 918 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 KCNH7Q9NS40 1196 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ARHGAP28Q9P2N2 729 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 TNPO3Q9Y5L0 923 aaKnown RBP3.21□□□□□ -1.9
USH2A-204ENST00000481786 B3GALT1Q9Y5Z6 326 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 PREX2Q70Z35 1606 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 PARD3Q8TEW0 1356 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 ERVK-7P63135 1459 aa3.21□□□□□ -1.9
USH2A-204ENST00000481786 SYCP2Q9BX26 1530 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 GPATCH8Q9UKJ3 1502 aaKnown RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 UBR1Q8IWV7 1749 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 CDC42BPBQ9Y5S2 1711 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 RASSF10A6NK89 507 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 B4E1Z4 1266 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 M0R2C6 588 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 RFPL3O75679 317 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 GLRX3O76003 335 aaKnown RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 ASMTLO95671 621 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 ASLP04424 464 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 MMEP08473 750 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 SDSP20132 328 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 SDHAP31040 664 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 MC4RP32245 332 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 IGFALSP35858 605 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 IL13RA1P78552 427 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 MRPS21P82921 87 aaKnown RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 ZNF460Q14592 562 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 STILQ15468 1287 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 NBPF8Q3BBV2 869 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 CATSPEREQ5SY80 951 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 MAMDC4Q6UXC1 1216 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 DPP8Q6V1X1 898 aaPredicted RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 DDX53Q86TM3 631 aaKnown RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 SYNPOQ8N3V7 929 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 C2orf69Q8N8R5 385 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 ASB15Q8WXK1 588 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 AMNQ9BXJ7 453 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 GALNT8Q9NY28 637 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 SAMD15Q9P1V8 674 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 HECAQ9UBI9 543 aaPredicted RBP3.2□□□□□ -1.9
USH2A-204ENST00000481786 AATKQ6ZMQ8 1374 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 ADGBQ8N7X0 1667 aa3.2□□□□□ -1.9
USH2A-204ENST00000481786 TRAF5O00463 557 aa3.19□□□□□ -1.9
USH2A-204ENST00000481786 FOXP2O15409 715 aa3.19□□□□□ -1.9
USH2A-204ENST00000481786 OPA1O60313 960 aa3.19□□□□□ -1.9
USH2A-204ENST00000481786 RAD17O75943 681 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms