RNA–Protein interactions for RNA: ENST00000480683.2

KCNMA1-219, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-219ENST00000480683 KRT35Q92764 455 aa16.76■□□□□ 0.27
KCNMA1-219ENST00000480683 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
KCNMA1-219ENST00000480683 INTS9Q9NV88 658 aaKnown RBP16.76■□□□□ 0.27
KCNMA1-219ENST00000480683 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 GHRP10912 638 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 PECAM1P16284 738 aaPredicted RBP16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 QRICH1Q2TAL8 776 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 CCDC65Q8IXS2 484 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 SLC35G2Q8TBE7 412 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 FAM86B1E9PN63 330 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 EML1O00423 815 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 FAM86B2P0C5J1 330 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 HOXD13P35453 343 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 CTNNAL1Q9UBT7 734 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 MYH4Q9Y623 1939 aa16.75■□□□□ 0.27
KCNMA1-219ENST00000480683 DDX3XO00571 662 aaKnown RBP eCLIP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 PAEPP09466 180 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SLC29A2Q14542 456 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 LONP2Q86WA8 852 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 FBXO25Q8TCJ0 367 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 RNF25Q96BH1 459 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SH3BP1Q9Y3L3 701 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 RPS6KA3P51812 740 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 DLG4P78352 724 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 ZNF268Q14587 947 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 TMEM237Q96Q45 408 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 EPB41L4BQ9H329 900 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SEMA4AQ9H3S1 761 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 USP34Q70CQ2 3546 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 BLMHQ13867 455 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SEPT2Q15019 361 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 CBWD6Q4V339 395 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 FIGNQ5HY92 759 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 CBWD3Q5JTY5 395 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 CBWD5Q5RIA9 395 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 RNF220Q5VTB9 566 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 PIGWQ7Z7B1 504 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 TRIM59Q8IWR1 403 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 CTNNBL1Q8WYA6 563 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 RMDN2Q96LZ7 410 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 DAGLAQ9Y4D2 1042 aa16.74■□□□□ 0.27
KCNMA1-219ENST00000480683 TCP11X1B4DZS4 312 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 RHBDL3P58872 404 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 CCDC127Q96BQ5 260 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 KCNK9Q9NPC2 374 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 BATF3Q9NR55 127 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 ZFATQ9P243 1243 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 GH1P01241 217 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 PRPHP41219 470 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 LONRF1Q17RB8 773 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 AGBL2Q5U5Z8 902 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 SLC30A9Q6PML9 568 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 FITM2Q8N6M3 262 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 PAPOLBQ9NRJ5 636 aaKnown RBP16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 HOMER2Q9NSB8 354 aa16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 CORO1CQ9ULV4 474 aaPredicted RBP16.73■□□□□ 0.27
KCNMA1-219ENST00000480683 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 MSH2P43246 934 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 SSR1P43307 286 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 RWDD2BP57060 319 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 SESN3P58005 492 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 CUL1Q13616 776 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 CRELD2Q6UXH1 353 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 PHC3Q8NDX5 983 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 TPCN2Q8NHX9 752 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 DYDC1Q8WWB3 177 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ALG3Q92685 438 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 TLCD1Q96CP7 247 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 FMO2Q99518 471 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ANKRD33BA6NCL7 494 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 PGRMC1O00264 195 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 DRAP1Q14919 205 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
KCNMA1-219ENST00000480683 ATP8B4Q8TF62 1192 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms