RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 SLC26A7Q8TE54 656 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 NLRP4Q96MN2 994 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 CCDC22O60826 627 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 IRX1P78414 480 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 CASP8Q14790 479 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ALKBH5Q6P6C2 394 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
VEGFA-212ENST00000480614 TBC1D22BQ9NU19 505 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 UBE4BO95155 1302 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 MECOMQ03112 1051 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 INPP5AQ14642 412 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 ABHD8Q96I13 439 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 BLOC1S6Q9UL45 172 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 AP1B1Q10567 949 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 NUDCD3Q8IVD9 361 aa10.14□□□□□ -0.79
VEGFA-212ENST00000480614 RNF103-CHMP3A0A140T963 221 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 RASA4BC9J798 803 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 RASA4O43374 803 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 DOK7Q18PE1 504 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MB21D1Q8N884 522 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PIGSQ96S52 555 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 COA1Q9GZY4 146 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 NOVA2Q9UNW9 492 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CTIFO43310 598 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 RALAP11233 206 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CHRNA3P32297 505 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 KSR1Q8IVT5 923 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 DBNLQ9UJU6 430 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 GSNP06396 782 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MMEP08473 750 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 TBC1D1Q86TI0 1168 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PHF21AQ96BD5 680 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ABT1Q9ULW3 272 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CLDN3O15551 220 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 HADHAP40939 763 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 KIF20BQ96Q89 1820 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CLIC2O15247 247 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 HUS1O60921 280 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MIGA2Q7L4E1 593 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 DGKHQ86XP1 1220 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 SH3GL3Q99963 347 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 TRIP13Q15645 432 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 TNIP2Q8NFZ5 429 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF526Q8TF50 670 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 ABCB11O95342 1321 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 APOL1O14791 398 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CLCN6P51797 869 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 HIBCHQ6NVY1 386 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 CCDC24Q8N4L8 307 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 GRAMD1AQ96CP6 724 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 SMYD3Q9H7B4 428 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 FTCDO95954 541 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 EIF2B5Q13144 721 aaKnown RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PPP6R3Q5H9R7 873 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 MTA3Q9BTC8 594 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 FAM129AQ9BZQ8 928 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 PCIF1Q9H4Z3 704 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 EHD2Q9NZN4 543 aa10.13□□□□□ -0.79
VEGFA-212ENST00000480614 KIAA0391O15091 583 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 FDX1P10109 184 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 HOXD10P28358 340 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 RBBP7Q16576 425 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 TTC17Q96AE7 1141 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SOWAHDA6NJG2 315 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 ZNF197O14709 1029 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 RRM2BQ7LG56 351 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SNF8Q96H20 258 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PSMD3O43242 534 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 POLE2P56282 527 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 MYO1CO00159 1063 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 LBRQ14739 615 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CCDC92Q53HC0 331 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 HABP4Q5JVS0 413 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 NUGGCQ68CJ6 796 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 TWF2Q6IBS0 349 aaKnown RBP10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SH3KBP1Q96B97 665 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 SLC10A4Q96EP9 437 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 PKD2L2Q9NZM6 624 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 DAB2P98082 770 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 CDC42EP1Q00587 391 aa10.12□□□□□ -0.79
VEGFA-212ENST00000480614 MTMR1Q13613 665 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms