RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GCOM2Q9BZD3 368 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 ZBP1Q9H171 429 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 MFSD1Q9H3U5 465 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 CYP26B1Q9NR63 512 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 FAM217BQ9NTX9 383 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 DZANK1Q9NVP4 752 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 DDX25Q9UHL0 483 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 DBR1Q9UK59 544 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 IRAK3Q9Y616 596 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 RIF1Q5UIP0 2472 aaKnown RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 MSH4O15457 936 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 CCNT1O60563 726 aaKnown RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 CTSAP10619 480 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 POLGP54098 1239 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 BCAR1P56945 870 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 CDC42EP1Q00587 391 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 NCBP1Q09161 790 aaKnown RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 TDGQ13569 410 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 ANGPT1Q15389 498 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 TMEM132AQ24JP5 1023 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 INF2Q27J81 1249 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 GALNT17Q6IS24 598 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 CATSPER4Q7RTX7 472 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 RHPN2Q8IUC4 686 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 VPS52Q8N1B4 723 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 BCL7CQ8WUZ0 217 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 CRYGNQ8WXF5 182 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 SLC7A3Q8WY07 619 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF274Q96GC6 653 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 NLRP4Q96MN2 994 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 RIT2Q99578 217 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 INO80BQ9C086 356 aaPredicted RBP7.94□□□□□ -1.14
COL17A1-205ENST00000480127 DACT1Q9NYF0 836 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 MYO10Q9HD67 2058 aa7.94□□□□□ -1.14
COL17A1-205ENST00000480127 FAM186AA6NE01 2351 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 MED19A0JLT2 244 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 ADAMTS3O15072 1205 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 TDP2O95551 362 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 DARSP14868 501 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 FGFR4P22455 802 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 ALDH7A1P49419 539 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GPC3P51654 580 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GIT2Q14161 759 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 SAFBQ15424 915 aaKnown RBP eCLIP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 LONRF3Q496Y0 759 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 XKR3Q5GH77 459 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 NCAPH2Q6IBW4 605 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 PPP4R3AQ6IN85 833 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 TMC5Q6UXY8 1006 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 PIK3AP1Q6ZUJ8 805 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 NEK8Q86SG6 692 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GPR149Q86SP6 731 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 DDX53Q86TM3 631 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 EXOC8Q8IYI6 725 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 RDM1Q8NG50 284 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GJA10Q969M2 543 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 RMDN1Q96DB5 314 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 TMEM169Q96HH4 297 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 IGSF21Q96ID5 467 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 FAM193BQ96PV7 902 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 VN1R3Q9BXE9 311 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 MRPL9Q9BYD2 267 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 UNC45AQ9H3U1 944 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 NRDE2Q9H7Z3 1164 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 KCNK12Q9HB15 430 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 ZSWIM6Q9HCJ5 1215 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 SUCLA2Q9P2R7 463 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 ORC3Q9UBD5 711 aaPredicted RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 DUSP12Q9UNI6 340 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 KCNJ14Q9UNX9 436 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 PIN4Q9Y237 131 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 INPP5FQ9Y2H2 1132 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 GVINP1Q7Z2Y8 2422 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 CACNA1AO00555 2505 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 MYH9P35579 1960 aaKnown RBP7.93□□□□□ -1.14
COL17A1-205ENST00000480127 EVPLQ92817 2033 aa7.93□□□□□ -1.14
COL17A1-205ENST00000480127 DENND4AQ7Z401 1863 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 DMDP11532 3685 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 MEIS3P2A8K0S8 358 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 NARSO43776 548 aaKnown RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF862O60290 1169 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 ZC3H11AO75152 810 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CSDE1O75534 798 aaKnown RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 ERLIN2O94905 339 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 GALTP07902 379 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 SRGAP2CP0DJJ0 459 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 SKIP12755 728 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CIITAP33076 1130 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 KRT2P35908 639 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 PSMC5P62195 406 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 PTPN14Q15678 1187 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 GLB1LQ6UWU2 654 aa7.92□□□□□ -1.14
COL17A1-205ENST00000480127 CCDC149Q6ZUS6 474 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms