RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 FOXQ1Q9C009 403 aa9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 CYP26B1Q9NR63 512 aa9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 PATJQ8NI35 1801 aa9.42□□□□□ -0.9
EFEMP1-211ENST00000480016 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 NOP56O00567 594 aaKnown RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 SGSM2O43147 1006 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 LILRB3O75022 631 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 DXOO77932 396 aaKnown RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 CEACAM1P13688 526 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 HOXA13P31271 388 aaPredicted RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 TECP42680 631 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 PTH1RQ03431 593 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 PTK7Q13308 1070 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 PGM5Q15124 567 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 CELF3Q5SZQ8 465 aaKnown RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 GDF6Q6KF10 455 aaPredicted RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 NFXL1Q6ZNB6 911 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 LRRC8DQ7L1W4 858 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 PPP1R13LQ8WUF5 828 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 RRP36Q96EU6 259 aaKnown RBP9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 ALG1Q9BT22 464 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 MTA3Q9BTC8 594 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 MYL10Q9BUA6 226 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 ZMYND15Q9H091 742 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 KCNK12Q9HB15 430 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 GTF2IRD1Q9UHL9 959 aa9.41□□□□□ -0.9
EFEMP1-211ENST00000480016 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 OPLAHO14841 1288 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 PPP1R11O60927 126 aaPredicted RBP9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 DDAH1O94760 285 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 UPP2O95045 317 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 GGPS1O95749 300 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 F2P00734 622 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 ITGB1P05556 798 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 CALM1P0DP23 149 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 CALM2P0DP24 149 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 CALM3P0DP25 149 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 GNAT1P11488 350 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 MCM5P33992 734 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 RBL2Q08999 1139 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 NEDD9Q14511 834 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 XRRA1Q6P2D8 792 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 PCSK4Q6UW60 755 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 SMARCC2Q8TAQ2 1214 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 KAT2BQ92831 832 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 TMEM87BQ96K49 555 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 NECTIN4Q96NY8 510 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 CTAGE1Q96RT6 745 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 FAM126AQ9BYI3 521 aaPredicted RBP9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 IL25Q9H293 177 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 HDAC6Q9UBN7 1215 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 USTQ9Y2C2 406 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 RWDD3Q9Y3V2 267 aa9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.9
EFEMP1-211ENST00000480016 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.91
EFEMP1-211ENST00000480016 FLNCQ14315 2725 aa9.4□□□□□ -0.91
EFEMP1-211ENST00000480016 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 HAS3O00219 553 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 CAPN9O14815 690 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 FIBPO43427 364 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 ZNF286BP0CG31 522 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 CKBP12277 381 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 DUSP6Q16828 381 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 SYNE3Q6ZMZ3 975 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 NLRX1Q86UT6 975 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 IGDCC4Q8TDY8 1250 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 PIBF1Q8WXW3 757 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 PLVAPQ9BX97 442 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 SPZ1Q9BXG8 430 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 ADAM7Q9H2U9 754 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 CCDC86Q9H6F5 360 aaKnown RBP9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 ZNF215Q9UL58 517 aaPredicted RBP9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 USP9YO00507 2555 aaPredicted RBP9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 LRRK2Q5S007 2527 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
EFEMP1-211ENST00000480016 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
EFEMP1-211ENST00000480016 B8ZZF3 427 aa9.38□□□□□ -0.91
EFEMP1-211ENST00000480016 H3BRB1 525 aa9.38□□□□□ -0.91
EFEMP1-211ENST00000480016 PRC1O43663 620 aa9.38□□□□□ -0.91
EFEMP1-211ENST00000480016 CYTH3O43739 400 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms