RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 CALR3Q96L12 384 aaKnown RBP20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 IWS1Q96ST2 819 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 IKZF4Q9H2S9 585 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 SUCLA2Q9P2R7 463 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 TMEM59LQ9UK28 342 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 ZHX2Q9Y6X8 837 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 ALAS1P13196 640 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 PLS3P13797 630 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 DNA2P51530 1060 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 MTMR1Q13613 665 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 RASA3Q14644 834 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 EIF1ADQ8N9N8 165 aaKnown RBP20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 SYTL5Q8TDW5 730 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 CCDC43Q96MW1 224 aaKnown RBP20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 ST6GALNAC4Q9H4F1 302 aa20.75■□□□□ 0.91
TNFRSF8-204ENST00000479933 NCANO14594 1321 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 MAPK13O15264 365 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 HEXIM1O94992 359 aaKnown RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 RARRES1P49788 294 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CBWD6Q4V339 395 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CBWD3Q5JTY5 395 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CBWD5Q5RIA9 395 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 PEX26Q7Z412 305 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 YTHDF3Q7Z739 585 aaKnown RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 IL31RAQ8NI17 732 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 PACSIN2Q9UNF0 486 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CTDP1Q9Y5B0 961 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 AGPSO00116 658 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CTNND1O60716 968 aaKnown RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 TMEM253P0C7T8 217 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 ITGB3BPQ13352 177 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 C11orf91Q3C1V1 193 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 SLC16A10Q8TF71 515 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 KRT12Q99456 494 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 CAPS2Q9BXY5 557 aa20.74■□□□□ 0.91
TNFRSF8-204ENST00000479933 GOLGA6CA6NDK9 693 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 GOLGA8KD6RF30 607 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 HSF2BPO75031 334 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 GOLGA6DP0CG33 693 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 TRIM49P0CI25 452 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 TRIM49CP0CI26 452 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 JAK3P52333 1124 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 PLCB4Q15147 1175 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 WLSQ5T9L3 541 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 C4orf19Q8IY42 314 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 CPXCR1Q8N123 301 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 SH3GL2Q99962 352 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 GOLGA6AQ9NYA3 693 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 PKD2L1Q9P0L9 805 aa20.73■□□□□ 0.91
TNFRSF8-204ENST00000479933 PGRMC1O00264 195 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 ZBED4O75132 1171 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 SFNP31947 248 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 GALCP54803 685 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 MRPS9P82933 396 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 KIF22Q14807 665 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 LNX1Q8TBB1 728 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 BCAS4Q8TDM0 211 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 JDP2Q8WYK2 163 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 RUFY1Q96T51 708 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 SYT11Q9BT88 431 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 RAVER2Q9HCJ3 691 aaKnown RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 TCEAL9Q9UHQ7 104 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 PPP1R9AQ9ULJ8 1098 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 CCDC188H7C350 402 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 CEP104O60308 925 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 ZEB2O60315 1214 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 GLI1P08151 1106 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 GUCY2DQ02846 1103 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 WHAMMQ8TF30 809 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 SCFD2Q8WU76 684 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 RFFLQ8WZ73 363 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 ZKSCAN4Q969J2 545 aaPredicted RBP20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 TEPSINQ96N21 525 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 EPB41L5Q9HCM4 733 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 STXBP5LQ9Y2K9 1186 aa20.72■□□□□ 0.91
TNFRSF8-204ENST00000479933 FER1L6Q2WGJ9 1857 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 TNFAIP3P21580 790 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 YWHABP31946 246 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 RDXP35241 583 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 VAMP7P51809 220 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 ZNF280AP59817 542 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 SKOR1P84550 965 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 GTF2BQ00403 316 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 KRT76Q01546 638 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 NBPF20Q3BBV1 942 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 GLYCTKQ8IVS8 523 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 MREGQ8N565 214 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 CTNNBL1Q8WYA6 563 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 HINFPQ9BQA5 517 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 GPR88Q9GZN0 384 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 DIS3Q9Y2L1 958 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 CAPN7Q9Y6W3 813 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 RPS12P25398 132 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 PSMC5P62195 406 aa20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 MRPS25P82663 173 aaKnown RBP20.71■□□□□ 0.91
TNFRSF8-204ENST00000479933 PGM5Q15124 567 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms