RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 PCIF1Q9H4Z3 704 aa9.52□□□□□ -0.89
TTC3-216ENST00000479930 SMIM22K7EJ46 135 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ATF2P15336 505 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ALAS2P22557 587 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 IL15P40933 162 aaPredicted RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 BASP1P80723 227 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 RIN1Q13671 783 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 SNX17Q15036 470 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 AKIRIN2Q53H80 203 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 VASH1Q7L8A9 365 aaPredicted RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 CCDC54Q8NEL0 328 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 RIN3Q8TB24 985 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 TRIM17Q9Y577 477 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ADORA2BP29275 332 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 HSD17B3P37058 310 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 CHPF2Q9P2E5 772 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 MCF2LO15068 1137 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 KLRC2P26717 231 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 NSFP46459 744 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 MRPS35P82673 323 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 ARHGAP17Q68EM7 881 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 IQUBQ8NA54 791 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 LRRN4CLQ8ND94 238 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 NFU1Q9UMS0 254 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 PTPN22Q9Y2R2 807 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 KRT37O76014 449 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 CKBP12277 381 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 EIF4A1P60842 406 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 LPIN1Q14693 890 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 VPS39Q96JC1 886 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 SERPINI1Q99574 410 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 SPASTQ9UBP0 616 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 DNAI1Q9UI46 699 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 PCDHB12Q9Y5F1 795 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 RNF40O75150 1001 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ABRQ12979 859 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 RNF121Q9H920 327 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 INTS7Q9NVH2 962 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 RPS6KA6Q9UK32 745 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 FAM32AQ9Y421 112 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 HLA-DQA2P01906 255 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 FEN1P39748 380 aaKnown RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 SLFN13Q68D06 897 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.51□□□□□ -0.89
TTC3-216ENST00000479930 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 FCER1AP12319 257 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 PTK2Q05397 1052 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 PDIA6Q15084 440 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ZMYND11Q15326 602 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 CNGA2Q16280 664 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ATL3Q6DD88 541 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 FAM178BQ8IXR5 827 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 TESCQ96BS2 214 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 ELMO2Q96JJ3 720 aa9.51□□□□□ -0.89
TTC3-216ENST00000479930 VAMP4O75379 141 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 KRT76Q01546 638 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 RASSF6Q6ZTQ3 369 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 TFB1MQ8WVM0 346 aaKnown RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 TCEANC2Q96MN5 208 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 EFHD1Q9BUP0 239 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 KRCC1Q9NPI7 259 aaPredicted RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 PCDH11XQ9BZA7 1347 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 PCDH11YQ9BZA8 1340 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 AARSP49588 968 aaKnown RBP eCLIP9.5□□□□□ -0.895e-6■■■□□ 16
TTC3-216ENST00000479930 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 DDIASQ8IXT1 998 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 PGBD4Q96DM1 585 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 NRBF2Q96F24 287 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 WRNIP1Q96S55 665 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 ZHX2Q9Y6X8 837 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 MEFVO15553 781 aaPredicted RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 MCTP2Q6DN12 878 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 TRIM72Q6ZMU5 477 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 CSGALNACT2Q8N6G5 542 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 MAML1Q92585 1016 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 FAR2Q96K12 515 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 MAGEB5Q9BZ81 275 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 TUFT1Q9NNX1 390 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 H0Y626 953 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 KRT1P04264 644 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 FLT3P36888 993 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 PRAMEP78395 509 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 HIST2H2ACQ16777 129 aaPredicted RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 CEP55Q53EZ4 464 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 HIST2H2AA3Q6FI13 130 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 FAM9CQ8IZT9 166 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 PLEKHA5Q9HAU0 1116 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 DDX19AQ9NUU7 478 aaKnown RBP9.5□□□□□ -0.89
TTC3-216ENST00000479930 PSD3Q9NYI0 1048 aa9.5□□□□□ -0.89
TTC3-216ENST00000479930 RNF113AO15541 343 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms