RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 ZNF713Q8N859 430 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-238ENST00000479894 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-238ENST00000479894 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 WASF1Q92558 559 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 STAMQ92783 540 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 MXRA8Q9BRK3 442 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 RTKNQ9BST9 563 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 NCDNQ9UBB6 729 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 EPS15L1Q9UBC2 864 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 CA14Q9ULX7 337 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 FAM208BQ5VWN6 2430 aa17.55■□□□□ 0.4
HDLBP-238ENST00000479894 SPDYE4A6NLX3 237 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 DCNP07585 359 aaKnown RBP17.54■□□□□ 0.4
HDLBP-238ENST00000479894 ADRB1P08588 477 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 IFNAR1P17181 557 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 CLCN4P51793 760 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 SPECC1Q5M775 1068 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
HDLBP-238ENST00000479894 FEZF2Q8TBJ5 459 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 HELQQ8TDG4 1101 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 SECISBP2LQ93073 1101 aaKnown RBP17.54■□□□□ 0.4
HDLBP-238ENST00000479894 SNX21Q969T3 373 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
HDLBP-238ENST00000479894 EMILIN2Q9BXX0 1053 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 CDV3Q9UKY7 258 aaKnown RBP17.54■□□□□ 0.4
HDLBP-238ENST00000479894 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
HDLBP-238ENST00000479894 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 ATRXP46100 2492 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 N4BP1O75113 896 aaKnown RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 C22orf31O95567 290 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 RXRAP19793 462 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 CCT2P78371 535 aaKnown RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 STK3Q13188 491 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 HSCBQ8IWL3 235 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 GTF3C6Q969F1 213 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 IGSF21Q96ID5 467 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 RNF26Q9BY78 433 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
HDLBP-238ENST00000479894 ARHGEF3Q9NR81 526 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 DACT1Q9NYF0 836 aa17.53■□□□□ 0.4
HDLBP-238ENST00000479894 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 VTNP04004 478 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 XBP1P17861 261 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 BECN1Q14457 450 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 ME3Q16798 604 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 ABHD15Q6UXT9 468 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 TMEM173Q86WV6 379 aaPredicted RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 MAML2Q8IZL2 1156 aaPredicted RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
HDLBP-238ENST00000479894 RNF169Q8NCN4 708 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 PJA1Q8NG27 643 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 GPR152Q8TDT2 470 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 RSAD2Q8WXG1 361 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 PPP1R16BQ96T49 567 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 FBXO4Q9UKT5 387 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.4
HDLBP-238ENST00000479894 BACH1O14867 736 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 MAGEB2O15479 319 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 ZC3H11AO75152 810 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 KLRC2P26717 231 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 GBP2P32456 591 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 PDXDC2PQ6P474 469 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 CCDC60Q8IWA6 550 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 KLHL5Q96PQ7 755 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 ADAMTS10Q9H324 1103 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 AGO4Q9HCK5 861 aaKnown RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 ZNF302Q9NR11 478 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 CEP131Q9UPN4 1083 aa17.51■□□□□ 0.39
HDLBP-238ENST00000479894 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 V9GY48 417 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-238ENST00000479894 CLUHO75153 1309 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 POTEMA6NI47 508 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 PLEKHA8P1O95397 391 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 DEXIO95424 95 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 GALTP07902 379 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 GLULP15104 373 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 CDC27P30260 824 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 STARD6P59095 220 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 SCRN1Q12765 414 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 UBE2SQ16763 222 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 CEP55Q53EZ4 464 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 ELMSAN1Q6PJG2 1045 aa17.5■□□□□ 0.39
HDLBP-238ENST00000479894 DCLRE1AQ6PJP8 1040 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms