RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 FGFR4P22455 802 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 MCM7P33993 719 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 LTBRP36941 435 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
PRKN-207ENST00000479615 NOSTRINQ8IVI9 506 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 GJD3Q8N144 294 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
PRKN-207ENST00000479615 RNF149Q8NC42 400 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 NACC1Q96RE7 527 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
PRKN-207ENST00000479615 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 TLE6Q9H808 572 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 RNF19AQ9NV58 838 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 KANSL3Q9P2N6 904 aa16.77■□□□□ 0.28
PRKN-207ENST00000479615 CNTNAP2Q9UHC6 1331 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 ERLIN2O94905 339 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 MCM2P49736 904 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 RARRES1P49788 294 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 NDUFV1P49821 464 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 LRRC55Q6ZSA7 311 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
PRKN-207ENST00000479615 IGFLR1Q9H665 355 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 CD207Q9UJ71 328 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 DBR1Q9UK59 544 aaKnown RBP16.76■□□□□ 0.27
PRKN-207ENST00000479615 BRWD1Q9NSI6 2320 aa16.76■□□□□ 0.27
PRKN-207ENST00000479615 FSCN2O14926 492 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 EYA4O95677 639 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 IL9P15248 144 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 ATF7P17544 494 aaPredicted RBP16.75■□□□□ 0.27
PRKN-207ENST00000479615 ATP2B1P20020 1258 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKN-207ENST00000479615 IRS1P35568 1242 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 NRIP1P48552 1158 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 FOSBP53539 338 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 PTENP60484 403 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 COASYQ13057 564 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 SMAD4Q13485 552 aaKnown RBP16.75■□□□□ 0.27
PRKN-207ENST00000479615 SMAD2Q15796 467 aaKnown RBP16.75■□□□□ 0.27
PRKN-207ENST00000479615 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 MRPL10Q7Z7H8 261 aaKnown RBP16.75■□□□□ 0.27
PRKN-207ENST00000479615 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 HELQQ8TDG4 1101 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 RAB34Q9BZG1 259 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 MUC3AQ02505 3323 aa16.75■□□□□ 0.27
PRKN-207ENST00000479615 REV3LO60673 3130 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 LAD1O00515 517 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 ALADP13716 330 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 RPA1P27694 616 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
PRKN-207ENST00000479615 ARL2P36404 184 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 GIT2Q14161 759 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 PDIA5Q14554 519 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 TTC38Q5R3I4 469 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 NOTUMQ6P988 496 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 ADHFE1Q8IWW8 467 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 HACE1Q8IYU2 909 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 SLC39A11Q8N1S5 342 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 URGCPQ8TCY9 931 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 TCF25Q9BQ70 676 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 TMEM60Q9H2L4 133 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 XPNPEP1Q9NQW7 623 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 ENTPD7Q9NQZ7 604 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 BDP1A6H8Y1 2624 aa16.74■□□□□ 0.27
PRKN-207ENST00000479615 POTEMA6NI47 508 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 PI4K2BG5E9Z4 385 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 ZBTB39O15060 712 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 MBTPS2O43462 519 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 OFD1O75665 1012 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
PRKN-207ENST00000479615 TECP42680 631 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 BCAR1P56945 870 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 ERVFC1P60507 584 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 RNASELQ05823 741 aaKnown RBP16.73■□□□□ 0.27
PRKN-207ENST00000479615 ZNF174Q15697 407 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 DUSP6Q16828 381 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 TMEM184AQ6ZMB5 413 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 TMC7Q7Z402 723 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 CATSPER3Q86XQ3 398 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 MSLNLQ96KJ4 702 aa16.73■□□□□ 0.27
PRKN-207ENST00000479615 FNDC1Q4ZHG4 1894 aaPredicted RBP16.73■□□□□ 0.27
PRKN-207ENST00000479615 TCF20Q9UGU0 1960 aaKnown RBP16.72■□□□□ 0.27
PRKN-207ENST00000479615 WNT7AO00755 349 aa16.72■□□□□ 0.27
PRKN-207ENST00000479615 TBX10O75333 385 aa16.72■□□□□ 0.27
PRKN-207ENST00000479615 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
PRKN-207ENST00000479615 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKN-207ENST00000479615 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKN-207ENST00000479615 DLX2Q07687 328 aaPredicted RBP16.72■□□□□ 0.27
PRKN-207ENST00000479615 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
PRKN-207ENST00000479615 ADGRD2Q7Z7M1 963 aa16.72■□□□□ 0.27
PRKN-207ENST00000479615 RBM23Q86U06 439 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms