RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 LRRC43Q8N309 656 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 MCPH1Q8NEM0 835 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 SPPL3Q8TCT6 385 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 FAM105AQ9NUU6 356 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 CUL9Q8IWT3 2517 aa17.8■□□□□ 0.44
CYTH3-206ENST00000478541 A0A087WWV3 80 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 BMP1P13497 986 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 LAG3P18627 525 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 HOXA11P31270 313 aaPredicted RBP17.79■□□□□ 0.44
CYTH3-206ENST00000478541 UBE3AQ05086 875 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 CAPSQ13938 189 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 TCEAL5Q5H9L2 206 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 SPOUT1Q5T280 376 aaKnown RBP17.79■□□□□ 0.44
CYTH3-206ENST00000478541 LARP1BQ659C4 914 aaKnown RBP17.79■□□□□ 0.44
CYTH3-206ENST00000478541 LRRC55Q6ZSA7 311 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 COLGALT1Q8NBJ5 622 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 RNF169Q8NCN4 708 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 ASAP3Q8TDY4 903 aa17.79■□□□□ 0.44
CYTH3-206ENST00000478541 UBE2ZQ9H832 354 aaPredicted RBP17.79■□□□□ 0.44
CYTH3-206ENST00000478541 USO1O60763 962 aaKnown RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 GLRA2P23416 452 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 DNAJB1P25685 340 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 AXLP30530 894 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 CCT6AP40227 531 aaKnown RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 HELQQ8TDG4 1101 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 POF1BQ8WVV4 589 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 PABPC5Q96DU9 382 aaKnown RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 MRPL9Q9BYD2 267 aaKnown RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 POLR3FQ9H1D9 316 aaPredicted RBP17.78■□□□□ 0.44
CYTH3-206ENST00000478541 HCSTQ9UBK5 93 aa17.78■□□□□ 0.44
CYTH3-206ENST00000478541 MUC3AQ02505 3323 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 NCK2O43639 380 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 ERLIN2O94905 339 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 KCNQ1P51787 676 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 MBTD1Q05BQ5 628 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 IL17AQ16552 155 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 ECM1Q16610 540 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 DTHD1Q6ZMT9 781 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 MRPL10Q7Z7H8 261 aaKnown RBP17.77■□□□□ 0.44
CYTH3-206ENST00000478541 PGBD4Q96DM1 585 aa17.77■□□□□ 0.44
CYTH3-206ENST00000478541 TCF20Q9UGU0 1960 aaKnown RBP17.77■□□□□ 0.43
CYTH3-206ENST00000478541 ARHGEF35A5YM69 484 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 TSPAN1O60635 241 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 FGF18O76093 207 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 CYP11B2P19099 503 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 NCBP1Q09161 790 aaKnown RBP17.76■□□□□ 0.43
CYTH3-206ENST00000478541 AMHR2Q16671 573 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 UBXN11Q5T124 520 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 PADI6Q6TGC4 694 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 KCNT2Q6UVM3 1135 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 ADAMTS19Q8TE59 1207 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 CCDC51Q96ER9 411 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 KIAA1024Q9UPX6 916 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 PCDHB2Q9Y5E7 798 aa17.76■□□□□ 0.43
CYTH3-206ENST00000478541 MYO7AQ13402 2215 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 CARNS1A5YM72 827 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 INO80B-WBP1J3KQ70 363 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 PDCP20941 246 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 PPM1AP35813 382 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 HYAL1Q12794 435 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 LEXMQ3ZCV2 418 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 KRT79Q5XKE5 535 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 ARL6IP4Q66PJ3 421 aaKnown RBP17.75■□□□□ 0.43
CYTH3-206ENST00000478541 NOTUMQ6P988 496 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 GLB1LQ6UWU2 654 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 THNSL1Q8IYQ7 743 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 CNNM3Q8NE01 707 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 LPPQ93052 612 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
CYTH3-206ENST00000478541 ZNF558Q96NG5 402 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
CYTH3-206ENST00000478541 DDX19AQ9NUU7 478 aaKnown RBP17.75■□□□□ 0.43
CYTH3-206ENST00000478541 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 MEIS3P2A8K0S8 358 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 OFD1O75665 1012 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
CYTH3-206ENST00000478541 IRS1P35568 1242 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 CDCA2Q69YH5 1023 aaPredicted RBP17.74■□□□□ 0.43
CYTH3-206ENST00000478541 PDE12Q6L8Q7 609 aaKnown RBP17.74■□□□□ 0.43
CYTH3-206ENST00000478541 AGMOQ6ZNB7 445 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 KCTD17Q8N5Z5 321 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 MRPS27Q92552 414 aaKnown RBP17.74■□□□□ 0.43
CYTH3-206ENST00000478541 PRIMPOLQ96LW4 560 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 MMTAG2Q9BU76 263 aaKnown RBP17.74■□□□□ 0.43
CYTH3-206ENST00000478541 BHMT2Q9H2M3 363 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
CYTH3-206ENST00000478541 LRRIQ4A6NIV6 560 aa17.73■□□□□ 0.43
CYTH3-206ENST00000478541 PP2D1A8MPX8 630 aa17.73■□□□□ 0.43
CYTH3-206ENST00000478541 EYA4O95677 639 aa17.73■□□□□ 0.43
CYTH3-206ENST00000478541 ARF4P18085 180 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms