RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 RPGRQ92834 1020 aaKnown RBP5.06□□□□□ -1.6
HPS3-205ENST00000478525 DNAJC7Q99615 494 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 PITHD1Q9GZP4 211 aaPredicted RBP5.06□□□□□ -1.6
HPS3-205ENST00000478525 SYNPO2LQ9H987 977 aa5.06□□□□□ -1.6
HPS3-205ENST00000478525 NCOA5Q9HCD5 579 aaKnown RBP5.06□□□□□ -1.6
HPS3-205ENST00000478525 COL4A3Q01955 1670 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 ZAR1LA6NP61 321 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 MASP2O00187 686 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 PPFIA4O75335 1185 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 CFBP00751 764 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 EPHA7Q15375 998 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 NAALADL2Q58DX5 795 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 ESRP1Q6NXG1 681 aaKnown RBP5.05□□□□□ -1.6
HPS3-205ENST00000478525 LRP10Q7Z4F1 713 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 DDX53Q86TM3 631 aaKnown RBP5.05□□□□□ -1.6
HPS3-205ENST00000478525 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 CPEB1Q9BZB8 566 aaKnown RBP5.05□□□□□ -1.6
HPS3-205ENST00000478525 TANGO6Q9C0B7 1094 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 TOR3AQ9H497 397 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 MTG2Q9H4K7 406 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 SAMD15Q9P1V8 674 aa5.05□□□□□ -1.6
HPS3-205ENST00000478525 A0A0A6YYJ9 748 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 A0A0A6YYK5 440 aaPredicted RBP5.04□□□□□ -1.6
HPS3-205ENST00000478525 CCDC163A0A0D9SF12 145 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 CENPVL1A0A0U1RR11 272 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 PTPDC1A2A3K4 754 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 AHRRA9YTQ3 701 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 H7C1D1 291 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 LPXNO60711 386 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 CYP17A1P05093 508 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 GYPEP15421 78 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 ATP2B1P20020 1258 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 C21orf58P58505 322 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 ADCY2Q08462 1091 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 OLFML1Q6UWY5 402 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 Q6YL49 198 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 KANSL1Q7Z3B3 1105 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 SOX7Q9BT81 388 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 ENKD1Q9H0I2 346 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 ING3Q9NXR8 418 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 PTCH2Q9Y6C5 1203 aa5.04□□□□□ -1.6
HPS3-205ENST00000478525 OPHN1O60890 802 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 RECQL4O94761 1208 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 GAAP10253 952 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 IGFALSP35858 605 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 FAM189BP81408 668 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 CSRP2Q16527 193 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 UNQ6494/PRO21346Q6UXR6 183 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 NME9Q86XW9 330 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 PIK3C3Q8NEB9 887 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 OR52N2Q8NGI0 321 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 NAF1Q96HR8 494 aaKnown RBP5.03□□□□□ -1.6
HPS3-205ENST00000478525 FAM193BQ96PV7 902 aaPredicted RBP5.03□□□□□ -1.6
HPS3-205ENST00000478525 UIMC1Q96RL1 719 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 CPPED1Q9BRF8 314 aaPredicted RBP5.03□□□□□ -1.6
HPS3-205ENST00000478525 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 PRDM13Q9H4Q3 707 aa5.03□□□□□ -1.6
HPS3-205ENST00000478525 EIF2B4Q9UI10 523 aaKnown RBP5.03□□□□□ -1.6
HPS3-205ENST00000478525 TNPO3Q9Y5L0 923 aaKnown RBP5.03□□□□□ -1.6
HPS3-205ENST00000478525 B4E1Z4 1266 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 KIAA0355O15063 1070 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 HOXA3O43365 443 aaPredicted RBP5.02□□□□□ -1.61
HPS3-205ENST00000478525 LAG3P18627 525 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 GTF2F1P35269 517 aaKnown RBP eCLIP5.02□□□□□ -1.61
HPS3-205ENST00000478525 ZEB1P37275 1124 aaPredicted RBP5.02□□□□□ -1.61
HPS3-205ENST00000478525 CLK3P49761 638 aaKnown RBP5.02□□□□□ -1.61
HPS3-205ENST00000478525 ZNF460Q14592 562 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 ZNF174Q15697 407 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 C2orf27AQ580R0 203 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 ZKSCAN2Q63HK3 967 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 SYCE2Q6PIF2 218 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 C7orf31Q8N865 590 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 MYEOVQ96EZ4 313 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 MYL10Q9BUA6 226 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 SLC46A2Q9BY10 475 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 POFUT1Q9H488 388 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 CYP4F11Q9HBI6 524 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 SYNPO2Q9UMS6 1093 aa5.02□□□□□ -1.61
HPS3-205ENST00000478525 NRP1O14786 923 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 PLD2O14939 933 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 ALDH1A2O94788 518 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 PRPF6O94906 941 aaKnown RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 FSBPO95073 299 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 APOL3O95236 402 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 RAPGEF3O95398 923 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 ZNF37AP17032 561 aaPredicted RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 SLC9A1P19634 815 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 VPS72Q15906 364 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 METTL24Q5JXM2 366 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 STRIP1Q5VSL9 837 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 CREB3L3Q68CJ9 461 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 KIAA1841Q6NSI8 718 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 PHYKPLQ8IUZ5 450 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 CLUHP3Q96NS8 147 aa5.01□□□□□ -1.61
HPS3-205ENST00000478525 SRPK1Q96SB4 655 aaKnown RBP5.01□□□□□ -1.61
HPS3-205ENST00000478525 ELF4Q99607 663 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms