RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 BCL7CQ8WUZ0 217 aaPredicted RBP18.73■□□□□ 0.59
TRIM13-208ENST00000478111 HAS1Q92839 578 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 ASIC4Q96FT7 647 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 FAM20AQ96MK3 541 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 ZBP1Q9H171 429 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 NRDE2Q9H7Z3 1164 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 TBC1D13Q9NVG8 400 aa18.73■□□□□ 0.59
TRIM13-208ENST00000478111 DMDP11532 3685 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRIM13-208ENST00000478111 CXCL14O95715 111 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 GALTP07902 379 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 MRE11P49959 708 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 SIGLEC14Q08ET2 396 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 PTPN21Q16825 1174 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 EARS2Q5JPH6 523 aaKnown RBP18.72■□□□□ 0.59
TRIM13-208ENST00000478111 CATSPER4Q7RTX7 472 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 NEK8Q86SG6 692 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 VPS52Q8N1B4 723 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 AUTS2Q8WXX7 1259 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 RSPH1Q8WYR4 309 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 IGSF21Q96ID5 467 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 NLRP4Q96MN2 994 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 VN1R3Q9BXE9 311 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 DHX33Q9H6R0 707 aaKnown RBP18.72■□□□□ 0.59
TRIM13-208ENST00000478111 MINDY3Q9H8M7 445 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 TPCN1Q9ULQ1 816 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 IRAK3Q9Y616 596 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 STK36Q9NRP7 1315 aa18.72■□□□□ 0.59
TRIM13-208ENST00000478111 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 CTDNEP1O95476 244 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 P4HBP07237 508 aaKnown RBP18.71■□□□□ 0.59
TRIM13-208ENST00000478111 SKIP12755 728 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 NOMO2Q5JPE7 1267 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 AGMOQ6ZNB7 445 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 MRPL10Q7Z7H8 261 aaKnown RBP18.71■□□□□ 0.59
TRIM13-208ENST00000478111 DDX53Q86TM3 631 aaKnown RBP18.71■□□□□ 0.59
TRIM13-208ENST00000478111 FBXL6Q8N531 539 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
TRIM13-208ENST00000478111 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.59
TRIM13-208ENST00000478111 ADAM7Q9H2U9 754 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 POMKQ9H5K3 350 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 AGPAT5Q9NUQ2 364 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 DNAJB4Q9UDY4 337 aa18.71■□□□□ 0.59
TRIM13-208ENST00000478111 TBX3O15119 743 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 PFKFB2O60825 505 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 CTSAP10619 480 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 GCFC2P16383 781 aaKnown RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 SP100P23497 879 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 RAB27AP51159 221 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 AFF1P51825 1210 aaKnown RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 ITIH3Q06033 890 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 SPIRE1Q08AE8 756 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 EPHA7Q15375 998 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 GLB1LQ6UWU2 654 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 PIK3AP1Q6ZUJ8 805 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 RGL1Q9NZL6 768 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 PCDHB2Q9Y5E7 798 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 WDR87Q6ZQQ6 2873 aa18.7■□□□□ 0.58
TRIM13-208ENST00000478111 ZFHX2Q9C0A1 2572 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-208ENST00000478111 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 ZBTB39O15060 712 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 CCNT1O60563 726 aaKnown RBP18.69■□□□□ 0.58
TRIM13-208ENST00000478111 DKC1O60832 514 aaKnown RBP eCLIP18.69■□□□□ 0.58
TRIM13-208ENST00000478111 CDKL5O76039 1030 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 EPCAMP16422 314 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 SLC11A1P49279 550 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 KANK3Q6NY19 840 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 POTEDQ86YR6 584 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 C12orf76Q8N812 135 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-208ENST00000478111 FEZF2Q8TBJ5 459 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 SLC22A17Q8WUG5 538 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 PHOX2BQ99453 314 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 LXNQ9BS40 222 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 INPP5FQ9Y2H2 1132 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 PPME1Q9Y570 386 aa18.69■□□□□ 0.58
TRIM13-208ENST00000478111 C2orf16Q68DN1 1984 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-208ENST00000478111 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 C2CD4DB7Z1M9 353 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 DDHD2O94830 711 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 WEE2P0C1S8 567 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 FDPSP14324 419 aaKnown RBP18.68■□□□□ 0.58
TRIM13-208ENST00000478111 RFC5P40937 340 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 LAMTOR4Q0VGL1 99 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 CES5AQ6NT32 575 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 SRGAP1Q7Z6B7 1085 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms