RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 AGPAT5Q9NUQ2 364 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 FAM105AQ9NUU6 356 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 CLDND1Q9NY35 253 aa15.36■□□□□ 0.05
HDAC7-222ENST00000477937 ZNF623O75123 536 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 MED24O75448 989 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 ERLIN2O94905 339 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 GJB2P29033 226 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 NCBP1Q09161 790 aaKnown RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 PCBP1Q15365 356 aaKnown RBP eCLIP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 PUS10Q3MIT2 529 aaKnown RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 MCTP1Q6DN14 999 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 KCNT2Q6UVM3 1135 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 C4orf32Q8N8J7 132 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 MICAL1Q8TDZ2 1067 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 ZNF558Q96NG5 402 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 NECAB3Q96P71 396 aaPredicted RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 IGFLR1Q9H665 355 aa15.35■□□□□ 0.05
HDAC7-222ENST00000477937 PUF60Q9UHX1 559 aaKnown RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 DBR1Q9UK59 544 aaKnown RBP15.35■□□□□ 0.05
HDAC7-222ENST00000477937 H3BQ06 376 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 H3BQV1 296 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 MUTP22033 750 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 AXLP30530 894 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 IRS1P35568 1242 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PPM1AP35813 382 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 ARL2P36404 184 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 TOB1P50616 345 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PTENP60484 403 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PLCB3Q01970 1234 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PTGDRQ13258 359 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PDIA5Q14554 519 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 NBR1Q14596 966 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 LONRF3Q496Y0 759 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 HAUS3Q68CZ6 603 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PTCRAQ6ISU1 281 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 GLB1LQ6UWU2 654 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 MCPH1Q8NEM0 835 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 LPPQ93052 612 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PGBD4Q96DM1 585 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 TLR9Q9NR96 1032 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 SPG21Q9NZD8 308 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 SMC3Q9UQE7 1217 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
HDAC7-222ENST00000477937 SPTBN5Q9NRC6 3674 aaKnown RBP15.33■□□□□ 0.05
HDAC7-222ENST00000477937 INO80B-WBP1J3KQ70 363 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 LAD1O00515 517 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 HOXA11P31270 313 aaPredicted RBP15.33■□□□□ 0.04
HDAC7-222ENST00000477937 ALDH7A1P49419 539 aaKnown RBP15.33■□□□□ 0.04
HDAC7-222ENST00000477937 KRT17Q04695 432 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 ADAM15Q13444 863 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 POTEGQ6S5H5 508 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
HDAC7-222ENST00000477937 ASAP3Q8TDY4 903 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
HDAC7-222ENST00000477937 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
HDAC7-222ENST00000477937 FAM50BQ9Y247 325 aa15.33■□□□□ 0.04
HDAC7-222ENST00000477937 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 OFD1O75665 1012 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 GLRA2P23416 452 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■■■□ 23.7
HDAC7-222ENST00000477937 LTBRP36941 435 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 CCT6AP40227 531 aaKnown RBP15.32■□□□□ 0.04
HDAC7-222ENST00000477937 PBX3P40426 434 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 NRIP1P48552 1158 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 BCAR1P56945 870 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 ERVFC1P60507 584 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 CAPSQ13938 189 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 NOMO2Q5JPE7 1267 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 NOTUMQ6P988 496 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
HDAC7-222ENST00000477937 ADGRD2Q7Z7M1 963 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 RBM23Q86U06 439 aaKnown RBP15.32■□□□□ 0.04
HDAC7-222ENST00000477937 IGSF22Q8N9C0 903 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 CNNM3Q8NE01 707 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 NFKBIZQ9BYH8 718 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 TLE6Q9H808 572 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 TDRD15B5MCY1 1934 aaKnown RBP15.32■□□□□ 0.04
HDAC7-222ENST00000477937 NCOR1O75376 2440 aa15.32■□□□□ 0.04
HDAC7-222ENST00000477937 ARHGEF35A5YM69 484 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 MEIS3P2A8K0S8 358 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 TSPAN1O60635 241 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 PRPHP41219 470 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 RNASELQ05823 741 aaKnown RBP15.31■□□□□ 0.04
HDAC7-222ENST00000477937 UBXN11Q5T124 520 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 PADI6Q6TGC4 694 aa15.31■□□□□ 0.04
HDAC7-222ENST00000477937 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms