RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MYO3BQ8WXR4 1341 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 TCRBV7S2A1N4TA0A589 114 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 DDX3XO00571 662 aaKnown RBP eCLIP10.54□□□□□ -0.721e-7■■■■□ 22.2
CMC1-209ENST00000477739 CLDN3O15551 220 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 CREB1P16220 341 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 AARSP49588 968 aaKnown RBP eCLIP10.54□□□□□ -0.72
CMC1-209ENST00000477739 SEPT7Q16181 437 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 SEL1L2Q5TEA6 688 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.54□□□□□ -0.72
CMC1-209ENST00000477739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.54□□□□□ -0.72
CMC1-209ENST00000477739 SLC40A1Q9NP59 571 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 TOPORSQ9NS56 1045 aaPredicted RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 F5H423 210 aaPredicted RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 SLC16A4O15374 487 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 NDUFB10O96000 172 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 SCP2P22307 547 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 ADCY8P40145 1251 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 PEX3P56589 373 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 TMEM179Q6ZVK1 233 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 PRCCQ92733 491 aaPredicted RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 SEC16BQ96JE7 1060 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 DDX23Q9BUQ8 820 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 DDX20Q9UHI6 824 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
CMC1-209ENST00000477739 GOLGA8RI6L899 631 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 IQCDQ96DY2 449 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 KLF6Q99612 283 aaPredicted RBP10.53□□□□□ -0.72
CMC1-209ENST00000477739 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 FGFR1OP2Q9NVK5 253 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 TRIM33Q9UPN9 1127 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
CMC1-209ENST00000477739 A0A1B0GUL6 1792 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 EZRP15311 586 aaKnown RBP10.53□□□□□ -0.72
CMC1-209ENST00000477739 CTNNA2P26232 953 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 NPEPPSP55786 919 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 MEI1Q5TIA1 1274 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 PLA2G4FQ68DD2 849 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 TRIM59Q8IWR1 403 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 ANKS4BQ8N8V4 417 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 PSMD1Q99460 953 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 ZNF577Q9BSK1 485 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 FECHP22830 423 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 KCNV1Q6PIU1 500 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
CMC1-209ENST00000477739 CBWD1Q9BRT8 395 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 TRIM7Q9C029 511 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 C10orf88Q9H8K7 445 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
CMC1-209ENST00000477739 CASZ1Q86V15 1759 aa10.52□□□□□ -0.72
CMC1-209ENST00000477739 GNA14O95837 355 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 GIT2Q14161 759 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 WDR78Q5VTH9 848 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 PROM2Q8N271 834 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 MYCBPQ99417 103 aaPredicted RBP10.52□□□□□ -0.73
CMC1-209ENST00000477739 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 CCDC88AQ3V6T2 1871 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 TCP11X1B4DZS4 312 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 USP11P51784 963 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 CETN1Q12798 172 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 TMED2Q15363 201 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 SNCBQ16143 134 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 KYNUQ16719 465 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 TMEM119Q4V9L6 283 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 CCDC63Q8NA47 563 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 NEK9Q8TD19 979 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 MTRF1LQ9UGC7 380 aaKnown RBP10.52□□□□□ -0.73
CMC1-209ENST00000477739 SCN7AQ01118 1682 aa10.52□□□□□ -0.73
CMC1-209ENST00000477739 A0A1W2PQJ5 194 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 PIK3R2O00459 728 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 MSH4O15457 936 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 THAP12O43422 761 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 KRT15P19012 456 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 PSMC2P35998 433 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 OSTNP61366 133 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 CCDC137Q6PK04 289 aaKnown RBP10.51□□□□□ -0.73
CMC1-209ENST00000477739 CPA5Q8WXQ8 436 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 ALG3Q92685 438 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 ZDHHC15Q96MV8 337 aa10.51□□□□□ -0.73
CMC1-209ENST00000477739 INPP4AQ96PE3 977 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms