RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MYPNQ86TC9 1320 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 CYP27B1O15528 508 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 JUNP05412 331 aaKnown RBP6.52□□□□□ -1.37
VPS50-213ENST00000477572 KIR2DL3P43628 341 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 ABHD18Q0P651 414 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 TUBA3CQ13748 450 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 CNGB1Q14028 1251 aaPredicted RBP6.52□□□□□ -1.37
VPS50-213ENST00000477572 LRRC32Q14392 662 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 FAM214AQ32MH5 1076 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 GAGE13Q4V321 117 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 FNDC7Q5VTL7 733 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 TUBA3EQ6PEY2 450 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 ESPNLQ6ZVH7 1005 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 TMPRSS6Q8IU80 811 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 MIEF2Q96C03 454 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 HIST1H2AHQ96KK5 128 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 FEZ1Q99689 392 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 HIST1H2AJQ99878 128 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 ANO3Q9BYT9 981 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 MMRN2Q9H8L6 949 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 C14orf93Q9H972 538 aaKnown RBP6.52□□□□□ -1.37
VPS50-213ENST00000477572 SLC2A4RGQ9NR83 387 aa6.52□□□□□ -1.37
VPS50-213ENST00000477572 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 MAFGO15525 162 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 GAAP10253 952 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 ADCYAP1R1P41586 468 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 CD69Q07108 199 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 PPM1KQ8N3J5 372 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 PIK3C3Q8NEB9 887 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 NEU4Q8WWR8 484 aaPredicted RBP6.51□□□□□ -1.37
VPS50-213ENST00000477572 MFSD3Q96ES6 412 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 GPR87Q9BY21 358 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 PCDHB6Q9Y5E3 794 aa6.51□□□□□ -1.37
VPS50-213ENST00000477572 ST20-MTHFSA0A0A6YYL1 179 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 PRSS38A1L453 326 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 SUV39H1O43463 412 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 FAM20BO75063 409 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 FSBPO95073 299 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 CLEC2LP0C7M8 214 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 NPEPPSP55786 919 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 ZNF512Q96ME7 567 aaPredicted RBP6.5□□□□□ -1.37
VPS50-213ENST00000477572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS50-213ENST00000477572 PARPBPQ9NWS1 579 aa6.5□□□□□ -1.37
VPS50-213ENST00000477572 RPS6KA4O75676 772 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 ALDH1A2O94788 518 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 FKBP9O95302 570 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 CFBP00751 764 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 MYCLP1P12525 358 aaPredicted RBP6.49□□□□□ -1.37
VPS50-213ENST00000477572 MAN2A2P49641 1150 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 SLC25A3Q00325 362 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 MAN2A1Q16706 1144 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 FKBP9P1Q75LS8 142 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 AHI1Q8N157 1196 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 ATXN2LQ8WWM7 1075 aaKnown RBP6.49□□□□□ -1.37
VPS50-213ENST00000477572 CLIP3Q96DZ5 547 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 FDXACB1Q9BRP7 624 aaPredicted RBP6.49□□□□□ -1.37
VPS50-213ENST00000477572 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 EPC1Q9H2F5 836 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 AURKAIP1Q9NWT8 199 aaPredicted RBP6.49□□□□□ -1.37
VPS50-213ENST00000477572 PLAAQ9Y263 795 aa6.49□□□□□ -1.37
VPS50-213ENST00000477572 GSG1L2A8MUP6 293 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 LY86O95711 162 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 PFKMP08237 780 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 HK1P19367 917 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 LSP1P33241 339 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 MCM7P33993 719 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 CASRP41180 1078 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 SPIDRQ14159 915 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 TERF2Q15554 542 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
VPS50-213ENST00000477572 CDYL2Q8N8U2 506 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 ZNF610Q8N9Z0 462 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 ZNF483Q8TF39 744 aaPredicted RBP6.48□□□□□ -1.37
VPS50-213ENST00000477572 GAB3Q8WWW8 586 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 TRIM8Q9BZR9 551 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 PRDM12Q9H4Q4 367 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 ZNF703Q9H7S9 590 aaPredicted RBP6.48□□□□□ -1.37
VPS50-213ENST00000477572 PPP2R3BQ9Y5P8 575 aa6.48□□□□□ -1.37
VPS50-213ENST00000477572 A0A087X0B3 334 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 PDE8AO60658 829 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 RAB11FIP3O75154 756 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 LSSP48449 732 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 RABGGTBP53611 331 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 OCRLQ01968 901 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 PPARAQ07869 468 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 DDB1Q16531 1140 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 BROXQ5VW32 411 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 C11orf74Q86VG3 221 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 CXorf67Q86X51 503 aaPredicted RBP6.47□□□□□ -1.37
VPS50-213ENST00000477572 OR5M3Q8NGP4 307 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 MNTQ99583 582 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 EMC7Q9NPA0 242 aa6.47□□□□□ -1.37
VPS50-213ENST00000477572 USP36Q9P275 1121 aaKnown RBP6.47□□□□□ -1.37
VPS50-213ENST00000477572 KLRG2A4D1S0 409 aaPredicted RBP6.46□□□□□ -1.38
VPS50-213ENST00000477572 KDM1AO60341 852 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 MFAP3LO75121 409 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 GNAT2P19087 354 aa6.46□□□□□ -1.38
VPS50-213ENST00000477572 MGAT5Q09328 741 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms