RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CCDC169A6NNP5 214 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 SFI1A8K8P3 1242 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 K7ENM7 598 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 GPR32O75388 356 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 CHRNA1P02708 482 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 SRGAP2CP0DJJ0 459 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 GAP43P17677 238 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 DPYDQ12882 1025 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 FAM26DQ5JW98 314 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 MYCT1Q8N699 235 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 DEPTORQ8TB45 409 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 SCLYQ96I15 445 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 NUP62CLQ9H1M0 184 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 ADAMTS10Q9H324 1103 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 CLSTN2Q9H4D0 955 aa16.92■□□□□ 0.3
SEC13-215ENST00000477547 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 PHLPP2Q6ZVD8 1323 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 TIMP1P01033 207 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 GHRP10912 638 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 NPTX2P47972 431 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 CRYBB1P53674 252 aaPredicted RBP16.91■□□□□ 0.3
SEC13-215ENST00000477547 CDC42EP1Q00587 391 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 CDCA2Q69YH5 1023 aaPredicted RBP16.91■□□□□ 0.3
SEC13-215ENST00000477547 ZBTB8OSQ8IWT0 167 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 GCOM2Q9BZD3 368 aaPredicted RBP16.91■□□□□ 0.3
SEC13-215ENST00000477547 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 KMT5AQ9NQR1 393 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 EXOC1Q9NV70 894 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 SEL1LQ9UBV2 794 aa16.91■□□□□ 0.3
SEC13-215ENST00000477547 SLC16A4O15374 487 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
SEC13-215ENST00000477547 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
SEC13-215ENST00000477547 FOSL2P15408 326 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 ITGB8P26012 769 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 SMTNP53814 917 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 MBTPS1Q14703 1052 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 HERC4Q5GLZ8 1057 aaPredicted RBP16.9■□□□□ 0.3
SEC13-215ENST00000477547 FBXO47Q5MNV8 452 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 SPIRE2Q8WWL2 714 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 ERCC4Q92889 916 aaPredicted RBP16.9■□□□□ 0.3
SEC13-215ENST00000477547 CCDC47Q96A33 483 aaKnown RBP16.9■□□□□ 0.3
SEC13-215ENST00000477547 C2orf40Q9H1Z8 148 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
SEC13-215ENST00000477547 PTPRSQ13332 1948 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 INO80B-WBP1J3KQ70 363 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 KLRC4O43908 158 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 TRAK2O60296 914 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 SMC2O95347 1197 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 PARNO95453 639 aaKnown RBP16.89■□□□□ 0.29
SEC13-215ENST00000477547 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
SEC13-215ENST00000477547 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 PTENP60484 403 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 LPIN1Q14693 890 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 CAMK4Q16566 473 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 IFNLR1Q8IU57 520 aaPredicted RBP16.89■□□□□ 0.29
SEC13-215ENST00000477547 ELOA2Q8IYF1 753 aaPredicted RBP16.89■□□□□ 0.29
SEC13-215ENST00000477547 TMEM199Q8N511 208 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 SMARCE1Q969G3 411 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 NFKBIZQ9BYH8 718 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 INO80BQ9C086 356 aaPredicted RBP16.89■□□□□ 0.29
SEC13-215ENST00000477547 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 ARHGAP28Q9P2N2 729 aa16.89■□□□□ 0.29
SEC13-215ENST00000477547 MUC3AQ02505 3323 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 H0YCG3 227 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 NBNO60934 754 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 EIF4BP23588 611 aaKnown RBP16.88■□□□□ 0.29
SEC13-215ENST00000477547 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
SEC13-215ENST00000477547 RFC2P35250 354 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 MBTD1Q05BQ5 628 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 PAK2Q13177 524 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 KMT5BQ4FZB7 885 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 MFSD5Q6N075 450 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 USP38Q8NB14 1042 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 BADQ92934 168 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 HPS3Q969F9 1004 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 MINDY3Q9H8M7 445 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 MRPL44Q9H9J2 332 aaKnown RBP16.88■□□□□ 0.29
SEC13-215ENST00000477547 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
SEC13-215ENST00000477547 NOC2LQ9Y3T9 749 aaKnown RBP16.88■□□□□ 0.29
SEC13-215ENST00000477547 DENND3A2RUS2 1198 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 RBAK-RBAKDNI3L0D1 243 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 CSDE1O75534 798 aaKnown RBP16.87■□□□□ 0.29
SEC13-215ENST00000477547 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 ERLIN2O94905 339 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 GCNT3O95395 438 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 PRKCBP05771 671 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 CSF2RAP15509 400 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 FGFR4P22455 802 aa16.87■□□□□ 0.29
SEC13-215ENST00000477547 CD52P31358 61 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms