RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SH2D4BQ5SQS7 431 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 FBXW10Q5XX13 1052 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 NUGGCQ68CJ6 796 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 CWF19L1Q69YN2 538 aaKnown RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TTC19Q6DKK2 380 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 NAA16Q6N069 864 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 MTHFD1LQ6UB35 978 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC121Q6ZUS5 278 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 APBB1IPQ7Z5R6 666 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TRIM74Q86UV6 250 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TRIM73Q86UV7 250 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 MCATQ8IVS2 390 aaKnown RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 CKAP2LQ8IYA6 745 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TMEFF1Q8IYR6 380 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 ANKS4BQ8N8V4 417 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 IGSF22Q8N9C0 903 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 FAM81AQ8TBF8 368 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC12Q8WUD4 166 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 HDAC7Q8WUI4 952 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TSR2Q969E8 191 aaKnown RBP5.22□□□□□ -1.57
PTCD3-212ENST00000477520 SPDL1Q96EA4 605 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 PANX2Q96RD6 677 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 ANKZF1Q9H8Y5 726 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 EBF2Q9HAK2 575 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 HYPKQ9NX55 129 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 CTNNAL1Q9UBT7 734 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 SWAP70Q9UH65 585 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 WWC3Q9ULE0 1092 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 TACC3Q9Y6A5 838 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 NRAPQ86VF7 1730 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 ATRNO75882 1429 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 ATP10DQ9P241 1426 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 UBN2Q6ZU65 1347 aa5.22□□□□□ -1.57
PTCD3-212ENST00000477520 RGPD2P0DJD1 1756 aa5.21□□□□□ -1.57
PTCD3-212ENST00000477520 RGPD1P0DJD0 1748 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SHISA3A0PJX4 238 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 VPS37CA5D8V6 355 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 IRS4O14654 1257 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 N4BP3O15049 544 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 MGRN1O60291 552 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CAND2O75155 1236 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 DNAJC8O75937 253 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 VIMP08670 466 aaKnown RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 USP17L7P0C7H9 530 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SDHBP21912 280 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 VIPR1P32241 457 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 PAPOLAP51003 745 aaKnown RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CCNG1P51959 295 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 UBASH3AP57075 661 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 NLRP5P59047 1200 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 DEUP1Q05D60 604 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 KRT32Q14532 448 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 TAF7Q15545 349 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 DDB1Q16531 1140 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 TBC1D25Q3MII6 688 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 HSP90AB4PQ58FF6 505 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 C1orf141Q5JVX7 400 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 C1QTNF12Q5T7M4 302 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 PPP4R3AQ6IN85 833 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CYB5D1Q6P9G0 228 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 ZNF662Q6ZS27 426 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 RUFY3Q7L099 469 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SV2BQ7L1I2 683 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CACNA2D4Q7Z3S7 1137 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SPATA21Q7Z572 469 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 ARHGAP22Q7Z5H3 698 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 VSTM4Q8IW00 320 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CNTROBQ8N137 903 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 GALNT15Q8N3T1 639 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 AOPEPQ8N6M6 819 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 USHBP1Q8N6Y0 703 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 ZCRB1Q8TBF4 217 aaKnown RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 FBF1Q8TES7 1133 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 NUP133Q8WUM0 1156 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 LMBR1Q8WVP7 490 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CHAMP1Q96JM3 812 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC114Q96M63 670 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 GDAP1L1Q96MZ0 367 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 TEPSINQ96N21 525 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 PLEKHG4BQ96PX9 1271 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 RUFY1Q96T51 708 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 XPO4Q9C0E2 1151 aaKnown RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 EPN3Q9H201 632 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SIRT5Q9NXA8 310 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 CWC25Q9NXE8 425 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-212ENST00000477520 IFNKQ9P0W0 207 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 HMG20BQ9P0W2 317 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 DCTN4Q9UJW0 460 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 HPCAL4Q9UM19 191 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 SNX14Q9Y5W7 946 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 GMEB1Q9Y692 573 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 NCAPD2Q15021 1401 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 TCHHQ07283 1943 aa5.21□□□□□ -1.58
PTCD3-212ENST00000477520 PARP4Q9UKK3 1724 aaKnown RBP5.2□□□□□ -1.58
PTCD3-212ENST00000477520 CEMIPQ8WUJ3 1361 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 GOLGA6BA6NDN3 693 aa5.2□□□□□ -1.58
PTCD3-212ENST00000477520 SOWAHDA6NJG2 315 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms