RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 NTPCRQ9BSD7 190 aaKnown RBP10.24□□□□□ -0.77
PGK1-204ENST00000477335 SENP6Q9GZR1 1112 aaPredicted RBP10.24□□□□□ -0.77
PGK1-204ENST00000477335 HSD3B7Q9H2F3 369 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 KCTD10Q9H3F6 313 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 CBX8Q9HC52 389 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 AKT3Q9Y243 479 aa10.24□□□□□ -0.77
PGK1-204ENST00000477335 EVPLQ92817 2033 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 A0A087WZ62 844 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 DENND3A2RUS2 1198 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 LRRIQ4A6NIV6 560 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 TGFB1I1O43294 461 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 FGFR4P22455 802 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 GTF2BQ00403 316 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 MBTD1Q05BQ5 628 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 MGAT3Q09327 533 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 PTGISQ16647 500 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 AMHR2Q16671 573 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 KIZQ2M2Z5 673 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 TTI2Q6NXR4 508 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 SLC39A4Q6P5W5 647 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 TRAF7Q6Q0C0 670 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 UBE2Q1Q7Z7E8 422 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 MYOCDQ8IZQ8 938 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 GUF1Q8N442 669 aaKnown RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 RETREG2Q8NC44 543 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 TMEM40Q8WWA1 233 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 NELFBQ8WX92 580 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 KCNN1Q92952 543 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 CCDC47Q96A33 483 aaKnown RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 DUSP9Q99956 384 aaKnown RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 JPH2Q9BR39 696 aaPredicted RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 FDXACB1Q9BRP7 624 aaPredicted RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 ST6GALNAC4Q9H4F1 302 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 C17orf75Q9HAS0 396 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 KMT5AQ9NQR1 393 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 LARSQ9P2J5 1176 aaKnown RBP10.23□□□□□ -0.77
PGK1-204ENST00000477335 MYH11P35749 1972 aa10.23□□□□□ -0.77
PGK1-204ENST00000477335 ANKRD63C9JTQ0 380 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 EIF3DO15371 548 aaKnown RBP eCLIP10.22□□□□□ -0.77
PGK1-204ENST00000477335 B4GALT5O43286 388 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 CD4P01730 458 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 GNAT1P11488 350 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 NLRP11P59045 1033 aaKnown RBP10.22□□□□□ -0.77
PGK1-204ENST00000477335 PTENP60484 403 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
PGK1-204ENST00000477335 SNX17Q15036 470 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 COL13A1Q5TAT6 717 aaPredicted RBP10.22□□□□□ -0.77
PGK1-204ENST00000477335 ANKRD40Q6AI12 368 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 MAP4K3Q8IVH8 894 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 EXOC8Q8IYI6 725 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 AOPEPQ8N6M6 819 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 ZSWIM2Q8NEG5 633 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 DEPTORQ8TB45 409 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 P2RX5Q93086 422 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 PAWRQ96IZ0 340 aaKnown RBP10.22□□□□□ -0.77
PGK1-204ENST00000477335 IFT74Q96LB3 600 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 HAPLN2Q9GZV7 340 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 TBX20Q9UMR3 447 aa10.22□□□□□ -0.77
PGK1-204ENST00000477335 FSD2A1L4K1 749 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 ABLIM1O14639 778 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 CHRNA1P02708 482 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 CTSHP09668 335 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 CCNE1P24864 410 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 TMOD1P28289 359 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 ZNF165P49910 485 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 DNM2P50570 870 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 MRPS6P82932 125 aaKnown RBP10.21□□□□□ -0.77
PGK1-204ENST00000477335 PAK1Q13153 545 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 PTK7Q13308 1070 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 MBTPS1Q14703 1052 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 PPP2R5AQ15172 486 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 KNOP1Q1ED39 458 aaKnown RBP10.21□□□□□ -0.77
PGK1-204ENST00000477335 LRRC26Q2I0M4 334 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 TRIM60Q495X7 471 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 RPAINQ86UA6 219 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 ANKLE1Q8NAG6 615 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 DHTKD1Q96HY7 919 aaPredicted RBP10.21□□□□□ -0.77
PGK1-204ENST00000477335 MAP7D2Q96T17 732 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 OSMRQ99650 979 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 BPIFA3Q9BQP9 254 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 NFKBIZQ9BYH8 718 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 FZD8Q9H461 694 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 RWDD2AQ9UIY3 292 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 CDY2AQ9Y6F7 541 aa10.21□□□□□ -0.77
PGK1-204ENST00000477335 UBE4BO95155 1302 aa10.21□□□□□ -0.78
PGK1-204ENST00000477335 ASAP2O43150 1006 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms