RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 ARNTL2Q8WYA1 636 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 LPPQ93052 612 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 ZNF689Q96CS4 500 aaPredicted RBP13.81□□□□□ -0.2
APTX-220ENST00000476858 CCDC43Q96MW1 224 aaKnown RBP13.81□□□□□ -0.2
APTX-220ENST00000476858 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 PPME1Q9Y570 386 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
APTX-220ENST00000476858 TRANK1O15050 2925 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 MAP3K13O43283 966 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 TSPAN1O60635 241 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 LPXNO60711 386 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 HIP1RO75146 1068 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 SSBP05455 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
APTX-220ENST00000476858 PLA2G4BP0C869 781 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 MUTP22033 750 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 DDIT3P35638 169 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
APTX-220ENST00000476858 SARSP49591 514 aaKnown RBP13.8□□□□□ -0.2
APTX-220ENST00000476858 MCM6Q14566 821 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 CATSPER4Q7RTX7 472 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 YME1L1Q96TA2 773 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 JPH2Q9BR39 696 aaPredicted RBP13.8□□□□□ -0.2
APTX-220ENST00000476858 RAB34Q9BZG1 259 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 DNM3Q9UQ16 869 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
APTX-220ENST00000476858 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
APTX-220ENST00000476858 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
APTX-220ENST00000476858 LRRIQ4A6NIV6 560 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
APTX-220ENST00000476858 CLLU1OSQ5K130 101 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
APTX-220ENST00000476858 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 SLC24A5Q71RS6 500 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
APTX-220ENST00000476858 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 SYT2Q8N9I0 419 aaPredicted RBP13.79□□□□□ -0.2
APTX-220ENST00000476858 RNF169Q8NCN4 708 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
APTX-220ENST00000476858 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 INSL6Q9Y581 213 aa13.79□□□□□ -0.2
APTX-220ENST00000476858 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 SPTLC2O15270 562 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
APTX-220ENST00000476858 B4GALT3O60512 393 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 BMP15O95972 392 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 UBA7P41226 1012 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 PHKA2P46019 1235 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 STK38Q15208 465 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
APTX-220ENST00000476858 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 SRGAP1Q7Z6B7 1085 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
APTX-220ENST00000476858 MCPH1Q8NEM0 835 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 AK8Q96MA6 479 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
APTX-220ENST00000476858 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 CCDC113Q9H0I3 377 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 CXCL16Q9H2A7 254 aa13.78□□□□□ -0.2
APTX-220ENST00000476858 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
APTX-220ENST00000476858 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 ASAP2O43150 1006 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 ARF4P18085 180 aaPredicted RBP13.77□□□□□ -0.21
APTX-220ENST00000476858 LIG1P18858 919 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
APTX-220ENST00000476858 PBX3P40426 434 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 ERVK-21P61565 698 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 MXD4Q14582 209 aaPredicted RBP13.77□□□□□ -0.21
APTX-220ENST00000476858 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
APTX-220ENST00000476858 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.21
APTX-220ENST00000476858 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 RAD54LQ92698 747 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 CDK5RAP3Q96JB5 506 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.21
APTX-220ENST00000476858 CASD1Q96PB1 797 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 REEP2Q9BRK0 252 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 HES2Q9Y543 173 aa13.77□□□□□ -0.21
APTX-220ENST00000476858 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 CSPG5O95196 566 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 NPTX2P47972 431 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 PEX3P56589 373 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
APTX-220ENST00000476858 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
APTX-220ENST00000476858 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms