RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZSCAN26Q16670 478 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 SNRNP48Q6IEG0 339 aaKnown RBP17.88■□□□□ 0.45
TMEM53-208ENST00000476724 SLFN11Q7Z7L1 901 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 TPCN2Q8NHX9 752 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 RNF146Q9NTX7 359 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 TMEM59LQ9UK28 342 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 DNAJC12Q9UKB3 198 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 AJAP1Q9UKB5 411 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-208ENST00000476724 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
TMEM53-208ENST00000476724 F8VZ95 297 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.453e-7■■■□□ 18.6
TMEM53-208ENST00000476724 IRF6O14896 467 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 GRIN3BO60391 1043 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 EVI5O60447 810 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 PEX10O60683 326 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 LYPLA2O95372 231 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 SNRPFP62306 86 aaKnown RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 PAK2Q13177 524 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 PCNX4Q63HM2 1172 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 NSMFQ6X4W1 530 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 EIF1ADQ8N9N8 165 aaKnown RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 SLC30A5Q8TAD4 765 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 OTUD5Q96G74 571 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 CALR3Q96L12 384 aaKnown RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 TIPINQ9BVW5 301 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 UBIAD1Q9Y5Z9 338 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 EXOC3O60645 756 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 IVLP07476 585 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 KRT13P13646 458 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 CYP2J2P51589 502 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 BFSP1Q12934 665 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 DRAP1Q14919 205 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 RNF207Q6ZRF8 634 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 TBC1D22BQ9NU19 505 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 SUCLA2Q9P2R7 463 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-208ENST00000476724 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
TMEM53-208ENST00000476724 GOLGA8KD6RF30 607 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 KCNK3O14649 394 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 P4HA2O15460 535 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 DHX15O43143 795 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 HEXIM1O94992 359 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 NF2P35240 595 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 CETN1Q12798 172 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 GJB7Q6PEY0 223 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 INTS8Q75QN2 995 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 KSR1Q8IVT5 923 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 DAW1Q8N136 415 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 INTS2Q9H0H0 1204 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 PACSIN2Q9UNF0 486 aaPredicted RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 HSF2BPO75031 334 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 GLI1P08151 1106 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 EIF2AK2P19525 551 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 QARSP47897 775 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 MRPS9P82933 396 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 MYL7Q01449 175 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 TKFCQ3LXA3 575 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 PEX26Q7Z412 305 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 ANKRD13AQ8IZ07 590 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 SCFD2Q8WU76 684 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 ACCSQ96QU6 501 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 KRT12Q99456 494 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 SH3GL2Q99962 352 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 AGO4Q9HCK5 861 aaKnown RBP17.86■□□□□ 0.45
TMEM53-208ENST00000476724 EPB41L5Q9HCM4 733 aa17.86■□□□□ 0.45
TMEM53-208ENST00000476724 K7ENM7 598 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 MAPK13O15264 365 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 TMEM253P0C7T8 217 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 DNA2P51530 1060 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 OAZ1P54368 228 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 BAATQ14032 418 aaPredicted RBP17.85■□□□□ 0.45
TMEM53-208ENST00000476724 CBWD6Q4V339 395 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 CBWD3Q5JTY5 395 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 CBWD5Q5RIA9 395 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 SLC17A8Q8NDX2 589 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 HINFPQ9BQA5 517 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 IKZF4Q9H2S9 585 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
TMEM53-208ENST00000476724 IQCA1LA6NCM1 817 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 CCDC188H7C350 402 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
TMEM53-208ENST00000476724 PLS3P13797 630 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 GALCP54803 685 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 GUCY2DQ02846 1103 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 PPATQ06203 517 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 PLS1Q14651 629 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 PGM5Q15124 567 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 MREGQ8N565 214 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 FAM76AQ8TAV0 307 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 WHAMMQ8TF30 809 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 IWS1Q96ST2 819 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 RUFY1Q96T51 708 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 HOXC10Q9NYD6 342 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 PKD2L1Q9P0L9 805 aa17.84■□□□□ 0.45
TMEM53-208ENST00000476724 STXBP5LQ9Y2K9 1186 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms