RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 B3GALT6Q96L58 329 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 LARP6Q9BRS8 491 aaKnown RBP13.48□□□□□ -0.25
HDAC6-219ENST00000476625 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 SLC26A6Q9BXS9 759 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 MRPL9Q9BYD2 267 aaKnown RBP13.48□□□□□ -0.25
HDAC6-219ENST00000476625 GCOM2Q9BZD3 368 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-219ENST00000476625 MINDY3Q9H8M7 445 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 DZANK1Q9NVP4 752 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 MYH15Q9Y2K3 1946 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 IGKV6-21A0A0C4DH24 114 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 EML1O00423 815 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 PSMD10O75832 226 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 CLCN4P51793 760 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 NPEPPSP55786 919 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 TBCKQ8TEA7 893 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 KCNK12Q9HB15 430 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 CYP26B1Q9NR63 512 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 WRAP73Q9P2S5 460 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-219ENST00000476625 CACNG4Q9UBN1 327 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 DOCK8Q8NF50 2099 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 DOCK6Q96HP0 2047 aa13.47□□□□□ -0.25
HDAC6-219ENST00000476625 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 NID2Q14112 1375 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 DCHS1Q96JQ0 3298 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 KRBA1A5PL33 1030 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 RFPL2O75678 378 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 AOC1P19801 751 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 KLRC2P26717 231 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 FGD1P98174 961 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 ANGPT1Q15389 498 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 GLB1LQ6UWU2 654 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 B3GNT9Q6UX72 402 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 ANO5Q75V66 913 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 CATSPER4Q7RTX7 472 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
HDAC6-219ENST00000476625 IRF2BPLQ9H1B7 796 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 IFT122Q9HBG6 1241 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 CA14Q9ULX7 337 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 DUSP12Q9UNI6 340 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-219ENST00000476625 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 R4GN57 208 aa13.46□□□□□ -0.25
HDAC6-219ENST00000476625 MTCL1Q9Y4B5 1905 aaKnown RBP13.46□□□□□ -0.25
HDAC6-219ENST00000476625 NRP1O14786 923 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 SLC37A4O43826 429 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 LILRB3O75022 631 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 CLCN5P51795 746 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 POLGP54098 1239 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-219ENST00000476625 TDGQ13569 410 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 TSGA10IPQ3SY00 556 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC149Q6ZUS6 474 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 DTWD2Q8NBA8 298 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 TMEM143Q96AN5 459 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 MYADMQ96S97 322 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 MIOSQ9NXC5 875 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 FBXL21Q9UKT6 434 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 HES2Q9Y543 173 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
HDAC6-219ENST00000476625 PATJQ8NI35 1801 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 ZBTB39O15060 712 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 MAFO75444 373 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-219ENST00000476625 SRGAP2CP0DJJ0 459 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 SFPQP23246 707 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC6-219ENST00000476625 GNA11P29992 359 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 ID4P47928 161 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 JAK3P52333 1124 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 NUBP1P53384 320 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 AK2P54819 239 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 NLRP5P59047 1200 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 NPY5RQ15761 445 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 LETM2Q2VYF4 491 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 SPECC1Q5M775 1068 aa13.44□□□□□ -0.26
HDAC6-219ENST00000476625 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms