RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
PGK1-203ENST00000476531 FAM86C1Q9NVL1 165 aa11.8□□□□□ -0.52
PGK1-203ENST00000476531 RCOR1Q9UKL0 485 aa11.8□□□□□ -0.52
PGK1-203ENST00000476531 CACNA1HO95180 2353 aa11.8□□□□□ -0.52
PGK1-203ENST00000476531 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
PGK1-203ENST00000476531 VTNP04004 478 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 MCM7P33993 719 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 STK38Q15208 465 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 RILPL1Q5EBL4 403 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 LLGL2Q6P1M3 1020 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 PLA2G4DQ86XP0 818 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 GPT2Q8TD30 523 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
PGK1-203ENST00000476531 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 CDH22Q9UJ99 828 aa11.79□□□□□ -0.52
PGK1-203ENST00000476531 NOL7Q9UMY1 257 aaKnown RBP11.79□□□□□ -0.52
PGK1-203ENST00000476531 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
PGK1-203ENST00000476531 SLC37A4O43826 429 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 GFRA3O60609 400 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 YEATS4O95619 227 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 CYP3A4P08684 503 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 ZNF76P36508 570 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 PBX3P40426 434 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 IL17AQ16552 155 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 KCNT2Q6UVM3 1135 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 NEK8Q86SG6 692 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 GJA10Q969M2 543 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
PGK1-203ENST00000476531 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
PGK1-203ENST00000476531 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 PCDHA7Q9UN72 937 aa11.78□□□□□ -0.52
PGK1-203ENST00000476531 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 SPTLC2O15270 562 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 HOXA2O43364 376 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 HOXB8P17481 243 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 TRAPPC10P48553 1259 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 CLCN3P51790 818 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 PTGDRQ13258 359 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 ZNF746Q6NUN9 644 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 ECHDC2Q86YB7 292 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 LRRC43Q8N309 656 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 KREMEN2Q8NCW0 462 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 SCAND2PQ9GZW5 306 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 FBXO2Q9UK22 296 aaPredicted RBP11.77□□□□□ -0.53
PGK1-203ENST00000476531 WDR87Q6ZQQ6 2873 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 DMDP11532 3685 aa11.77□□□□□ -0.53
PGK1-203ENST00000476531 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 CLASP2O75122 1294 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 PPM1AP35813 382 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 ME1P48163 572 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 NUBP1P53384 320 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 ATP2C1P98194 919 aaPredicted RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 KRT17Q04695 432 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 ZBTB33Q86T24 672 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 SMAP1Q8IYB5 467 aaPredicted RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 SLC39A11Q8N1S5 342 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 CASP10Q92851 521 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 ATOH1Q92858 354 aaPredicted RBP11.76□□□□□ -0.53
PGK1-203ENST00000476531 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 IRF2BPLQ9H1B7 796 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 ADAM7Q9H2U9 754 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 TBC1D22BQ9NU19 505 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 EVPLQ92817 2033 aa11.76□□□□□ -0.53
PGK1-203ENST00000476531 PLXNA3P51805 1871 aa11.75□□□□□ -0.53
PGK1-203ENST00000476531 VPS13AQ96RL7 3174 aa11.75□□□□□ -0.53
PGK1-203ENST00000476531 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
PGK1-203ENST00000476531 H0Y858 1186 aa11.75□□□□□ -0.53
PGK1-203ENST00000476531 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms