RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 ZNF844Q08AG5 666 aa9.15□□□□□ -0.94
MACF1-216ENST00000476350 COG2Q14746 738 aa9.15□□□□□ -0.94
MACF1-216ENST00000476350 ANKRD20A8PQ5CZ79 823 aa9.15□□□□□ -0.94
MACF1-216ENST00000476350 TMEM199Q8N511 208 aa9.15□□□□□ -0.94
MACF1-216ENST00000476350 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.94
MACF1-216ENST00000476350 BTNL10A8MVZ5 291 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 KRIT1O00522 736 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 DDNO94850 711 aaPredicted RBP9.15□□□□□ -0.95
MACF1-216ENST00000476350 BIRC3Q13489 604 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 AGBL2Q5U5Z8 902 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 TCP11Q8WWU5 503 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 CEP63Q96MT8 703 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 DDX25Q9UHL0 483 aaKnown RBP9.15□□□□□ -0.95
MACF1-216ENST00000476350 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 ATP11BQ9Y2G3 1177 aa9.15□□□□□ -0.95
MACF1-216ENST00000476350 COL14A1Q05707 1796 aaKnown RBP9.15□□□□□ -0.95
MACF1-216ENST00000476350 ANXA13P27216 316 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 STAT3P40763 770 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 ITPK1Q13572 414 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 SEPT2Q15019 361 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 SF3B3Q15393 1217 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 ECM1Q16610 540 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 CCDC50Q8IVM0 306 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 FAM151AQ8WW52 585 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.956e-7■□□□□ 10.6
MACF1-216ENST00000476350 UTP11Q9Y3A2 253 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 MROH7Q68CQ1 1323 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 TAF1P21675 1872 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 PGRMC1O00264 195 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 CABYRO75952 493 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 GPSM2P81274 684 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 IFFO1Q0D2I5 559 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 CTU1Q7Z7A3 348 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 ACTRT1Q8TDG2 376 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 SEC16BQ96JE7 1060 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 TMEM59LQ9UK28 342 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 NOVA2Q9UNW9 492 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 DDX60LQ5H9U9 1706 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 KIF13BQ9NQT8 1826 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 SKIP12755 728 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 RASA1P20936 1047 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 ECHS1P30084 290 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 FKBP3Q00688 224 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 NBPF9Q3BBW0 867 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 LIN9Q5TKA1 542 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 SEPT14Q6ZU15 432 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 DDX42Q86XP3 938 aaKnown RBP eCLIP9.14□□□□□ -0.95
MACF1-216ENST00000476350 PSMD1Q99460 953 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 DEFB129Q9H1M3 183 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 ADAMTS1Q9UHI8 967 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 MCM8Q9UJA3 840 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 SERPINA10Q9UK55 444 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 F8W8V4 182 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 CTNND1O60716 968 aaKnown RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 QPCTQ16769 361 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 FAM26FQ5R3K3 315 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 LMBR1Q8WVP7 490 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 GJA10Q969M2 543 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 INPP4AQ96PE3 977 aaPredicted RBP9.14□□□□□ -0.95
MACF1-216ENST00000476350 CCDC113Q9H0I3 377 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 NEUROG2Q9H2A3 272 aa9.14□□□□□ -0.95
MACF1-216ENST00000476350 PDHBP11177 359 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 POLGP54098 1239 aaPredicted RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 ADAM9Q13443 819 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 PDIA5Q14554 519 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 KCNK18Q7Z418 384 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 HOOK3Q86VS8 718 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 CACNA2D3Q8IZS8 1091 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 NSUN6Q8TEA1 469 aaKnown RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 KDM3AQ9Y4C1 1321 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 A0A087X0T9 212 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 FAM228BP0C875 321 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 CDK8P49336 464 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 DAAM2Q86T65 1068 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 SLFN12Q8IYM2 578 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 RAPGEF5Q92565 580 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 TACO1Q9BSH4 297 aaKnown RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 GANQ9H2C0 597 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 GOLPH3Q9H4A6 298 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 H0YGN5 161 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 CHUKO15111 745 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 TNNC2P02585 160 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 IGBP1P78318 339 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 PTK2Q05397 1052 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 UAP1Q16222 522 aaPredicted RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 UBE2SQ16763 222 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 LINC00116Q8NCU8 138 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 TMEM39AQ9NV64 488 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 MAP3K20Q9NYL2 800 aaKnown RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 NFS1Q9Y697 457 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 EFCAB14O75071 495 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 HARSP12081 509 aaKnown RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 FLT3P36888 993 aa9.13□□□□□ -0.95
MACF1-216ENST00000476350 MAGOHP61326 146 aaKnown RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
MACF1-216ENST00000476350 RNF207Q6ZRF8 634 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms