RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FAM160B2Q86V87 743 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MRPL41Q8IXM3 137 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MFSD2AQ8NA29 543 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 PRPF38AQ8NAV1 312 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CHST13Q8NET6 341 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 GIPC2Q8TF65 315 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 ELMO3Q96BJ8 720 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MAML3Q96JK9 1138 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 GBP4Q96PP9 640 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 STRBPQ96SI9 672 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MMP19Q99542 508 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 LBHD1Q9BQE6 289 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 FSD1Q9BTV5 496 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 SEZ6LQ9BYH1 1024 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 FOXQ1Q9C009 403 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 PUS7LQ9H0K6 701 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 NAPBQ9H115 298 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MBNL3Q9NUK0 354 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 FEM1BQ9UK73 627 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 ADAMTS6Q9UKP5 1117 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF214Q9UL59 606 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CTDP1Q9Y5B0 961 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CHD9Q3L8U1 2897 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CHD7Q9P2D1 2997 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 EYSQ5T1H1 3165 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 IGKV6D-41A0A0C4DH26 115 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 GSG1L2A8MUP6 293 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 PLA2G6O60733 806 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 NDUFB10O96000 172 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CST3P01034 146 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 TSPY3P0CV98 308 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 TSPY8P0CW00 308 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SDSP20132 328 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 VAMP1P23763 118 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CST5P28325 142 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CNGA1P29973 690 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CCND3P30281 292 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 STAT3P40763 770 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 STAT2P52630 851 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 RTP1P59025 263 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SEPT6Q14141 434 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 TMEM132BQ14DG7 1078 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 NKG7Q16617 165 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CCL14Q16627 93 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 FAM83BQ5T0W9 1011 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 FAM109BQ6ICB4 259 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SNRNP48Q6IEG0 339 aaKnown RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 RCSD1Q6JBY9 416 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 CCDC174Q6PII3 467 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 HID1Q8IV36 788 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SPICE1Q8N0Z3 855 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 PHC3Q8NDX5 983 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 REPS2Q8NFH8 660 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 EVI5LQ96CN4 794 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 DYNLL2Q96FJ2 89 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 COX4I2Q96KJ9 171 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 RHOVQ96L33 236 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 TINF2Q9BSI4 451 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 ACAD9Q9H845 621 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SLC38A10Q9HBR0 1119 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 EPB41L4AQ9HCS5 686 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SSU72Q9NP77 194 aaKnown RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 MTMR4Q9NYA4 1195 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-206ENST00000476045 RNF114Q9Y508 228 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 PCDHB5Q9Y5E4 795 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 BRWD1Q9NSI6 2320 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 SALL3Q9BXA9 1300 aa4.91□□□□□ -1.62
VPS13D-206ENST00000476045 GBF1Q92538 1859 aa4.9□□□□□ -1.62
VPS13D-206ENST00000476045 PRKAB2O43741 272 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ORC4O43929 436 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 EIF5BO60841 1220 aaKnown RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ZBED4O75132 1171 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 APPP05067 770 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 RNASE1P07998 156 aaKnown RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 NCLP19338 710 aaKnown RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 CYP2C19P33261 490 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 MRE11P49959 708 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 PPARAQ07869 468 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 BNIP3Q12983 259 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 PLCL1Q15111 1095 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 RABEP1Q15276 862 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 LRRC41Q15345 812 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 LRRC26Q2I0M4 334 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 TSHZ3Q63HK5 1081 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 CASC1Q6TDU7 716 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 MAMDC4Q6UXC1 1216 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 GAS2L3Q86XJ1 694 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 ZNF444Q8N0Y2 327 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 POU5F2Q8N7G0 328 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 PCSK9Q8NBP7 692 aaKnown RBP4.9□□□□□ -1.63
VPS13D-206ENST00000476045 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 PI4K2BQ8TCG2 481 aa4.9□□□□□ -1.63
VPS13D-206ENST00000476045 CHURC1Q8WUH1 139 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms