RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 NOMO2Q5JPE7 1267 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 TMEM87AQ8NBN3 555 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 KREMEN2Q8NCW0 462 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 LARP6Q9BRS8 491 aaKnown RBP27.94■■■□□ 2.06
TMEM54-205ENST00000475208 NRDE2Q9H7Z3 1164 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 CARNS1A5YM72 827 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 SLC37A4O43826 429 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 MTHFRP42898 656 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 RAB27AP51159 221 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 INF2Q27J81 1249 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 RARS2Q5T160 578 aaKnown RBP27.93■■■□□ 2.06
TMEM54-205ENST00000475208 GALNT17Q6IS24 598 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 BCL7CQ8WUZ0 217 aaPredicted RBP27.93■■■□□ 2.06
TMEM54-205ENST00000475208 ZNF274Q96GC6 653 aaPredicted RBP27.93■■■□□ 2.06
TMEM54-205ENST00000475208 IGSF21Q96ID5 467 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 RIPOR3Q96MK2 946 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 JPH2Q9BR39 696 aaPredicted RBP27.93■■■□□ 2.06
TMEM54-205ENST00000475208 DZANK1Q9NVP4 752 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 CYP46A1Q9Y6A2 500 aa27.93■■■□□ 2.06
TMEM54-205ENST00000475208 EML1O00423 815 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 WEE2P0C1S8 567 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 CTSAP10619 480 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 AVPR2P30518 371 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 POLGP54098 1239 aaPredicted RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 RNASELQ05823 741 aaKnown RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 STK3Q13188 491 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 CPLX2Q6PUV4 134 aaKnown RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 KRT25Q7Z3Z0 450 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 DDX53Q86TM3 631 aaKnown RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 FAM177A1Q8N128 213 aaPredicted RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 C12orf76Q8N812 135 aaPredicted RBP27.92■■■□□ 2.06
TMEM54-205ENST00000475208 CYP26B1Q9NR63 512 aa27.92■■■□□ 2.06
TMEM54-205ENST00000475208 ZNF623O75123 536 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 OFD1O75665 1012 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 PDGFBP01127 241 aaPredicted RBP27.91■■■□□ 2.06
TMEM54-205ENST00000475208 GALTP07902 379 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 EPCAMP16422 314 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 MTMR3Q13615 1198 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 LETM2Q2VYF4 491 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 GBP3Q9H0R5 595 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 IFT122Q9HBG6 1241 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 DNAJB4Q9UDY4 337 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 VAV3Q9UKW4 847 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 SORCS3Q9UPU3 1222 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 IRAK3Q9Y616 596 aa27.91■■■□□ 2.06
TMEM54-205ENST00000475208 QARSP47897 775 aaKnown RBP27.9■■■□□ 2.06
TMEM54-205ENST00000475208 NPEPPSP55786 919 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 PPP2R5CQ13362 524 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 GIT2Q14161 759 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 KIAA1841Q6NSI8 718 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 KANK3Q6NY19 840 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 SLC7A3Q8WY07 619 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 AGPAT5Q9NUQ2 364 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 KCNJ14Q9UNX9 436 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 COL4A3BPQ9Y5P4 624 aa27.9■■■□□ 2.06
TMEM54-205ENST00000475208 BRD1O95696 1058 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 SLC11A1P49279 550 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 UBALD2Q8IYN6 164 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 TDRD5Q8NAT2 981 aaKnown RBP27.89■■■□□ 2.06
TMEM54-205ENST00000475208 SLC22A17Q8WUG5 538 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 PGBD4Q96DM1 585 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 FAM86C1Q9NVL1 165 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 PCDHB2Q9Y5E7 798 aa27.89■■■□□ 2.06
TMEM54-205ENST00000475208 EPB41L2O43491 1005 aaKnown RBP27.88■■■□□ 2.05
TMEM54-205ENST00000475208 B4GALT3O60512 393 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 DKC1O60832 514 aaKnown RBP eCLIP27.88■■■□□ 2.05
TMEM54-205ENST00000475208 ZNF579Q8NAF0 562 aaKnown RBP27.88■■■□□ 2.05
TMEM54-205ENST00000475208 URGCPQ8TCY9 931 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 CEP170P1Q96L14 293 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 FAM20AQ96MK3 541 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 VN1R3Q9BXE9 311 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 SLKQ9H2G2 1235 aaPredicted RBP27.88■■■□□ 2.05
TMEM54-205ENST00000475208 KCNMB3Q9NPA1 279 aa27.88■■■□□ 2.05
TMEM54-205ENST00000475208 CCDC194A0A1B0GVG4 234 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 PTPN14Q15678 1187 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 ATAT1Q5SQI0 421 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 AGMOQ6ZNB7 445 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 NEK8Q86SG6 692 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 ZNF280BQ86YH2 543 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 TMEM143Q96AN5 459 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 TM6SF1Q9BZW5 370 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 SMOC2Q9H3U7 446 aa27.87■■■□□ 2.05
TMEM54-205ENST00000475208 WRAP73Q9P2S5 460 aaPredicted RBP27.87■■■□□ 2.05
TMEM54-205ENST00000475208 DBR1Q9UK59 544 aaKnown RBP27.87■■■□□ 2.05
TMEM54-205ENST00000475208 P4HBP07237 508 aaKnown RBP27.86■■■□□ 2.05
TMEM54-205ENST00000475208 CABP7Q86V35 215 aa27.86■■■□□ 2.05
TMEM54-205ENST00000475208 PSPC1Q8WXF1 523 aaKnown RBP27.86■■■□□ 2.05
TMEM54-205ENST00000475208 PHF20Q9BVI0 1012 aa27.86■■■□□ 2.05
TMEM54-205ENST00000475208 DHX33Q9H6R0 707 aaKnown RBP27.86■■■□□ 2.05
TMEM54-205ENST00000475208 MINDY3Q9H8M7 445 aa27.86■■■□□ 2.05
TMEM54-205ENST00000475208 BMP2KQ9NSY1 1161 aaPredicted RBP27.86■■■□□ 2.05
TMEM54-205ENST00000475208 PPME1Q9Y570 386 aa27.86■■■□□ 2.05
TMEM54-205ENST00000475208 CACNA1HO95180 2353 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 ASGR2P07307 311 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 SRGAP2CP0DJJ0 459 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 GCFC2P16383 781 aaKnown RBP27.85■■■□□ 2.05
TMEM54-205ENST00000475208 RFC5P40937 340 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 PPP4R3AQ6IN85 833 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 TMC5Q6UXY8 1006 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 SRGAP1Q7Z6B7 1085 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms