RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SYT2Q8N9I0 419 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ENGASEQ8NFI3 743 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 CAGE1Q8TC20 777 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 TMEM40Q8WWA1 233 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PRPF31Q8WWY3 499 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 RAD54LQ92698 747 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PBXIP1Q96AQ6 731 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 SCLYQ96I15 445 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ZNF668Q96K58 619 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PRRX2Q99811 253 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 AGO3Q9H9G7 860 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 MUTYHQ9UIF7 546 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 DNM3Q9UQ16 869 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 STK24Q9Y6E0 443 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PTPRSQ13332 1948 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 KDM3AQ9Y4C1 1321 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ARHGEF35A5YM69 484 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 MYMKA6NI61 221 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 RSPH10B2B2RC85 870 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 H0Y858 1186 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 POLR2DO15514 142 aaKnown RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 CSDE1O75534 798 aaKnown RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 DGAT1O75907 488 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 RSPH10BP0C881 870 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 SELPP16109 830 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 GLRA2P23416 452 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 IRS1P35568 1242 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 NDUFA8P51970 172 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 NLRP11P59045 1033 aaKnown RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 MRPS6P82932 125 aaKnown RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 TAP1Q03518 808 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 BFSP2Q13515 415 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 SNW1Q13573 536 aaKnown RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 LPIN1Q14693 890 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 KIZQ2M2Z5 673 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 LONRF3Q496Y0 759 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 RRAGBQ5VZM2 374 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 LRRC8DQ7L1W4 858 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 MAEAQ7L5Y9 396 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 FSIP1Q8NA03 581 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 DNAJC19Q96DA6 116 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 CALML4Q96GE6 196 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 PPP1R16BQ96T49 567 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 NT5C3AQ9H0P0 336 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 MINDY3Q9H8M7 445 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 ATP6V0A4Q9HBG4 840 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 IFT122Q9HBG6 1241 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 TLR9Q9NR96 1032 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 KBTBD4Q9NVX7 518 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 SUCLA2Q9P2R7 463 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-204ENST00000474665 KCNH3Q9ULD8 1083 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 CDY2AQ9Y6F7 541 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 ADGRA3Q8IWK6 1321 aa7.76□□□□□ -1.17
LIMD1-204ENST00000474665 TRANK1O15050 2925 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 TRIP11Q15643 1979 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 PRR23AA6NEV1 266 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 H3BQ06 376 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 HIP1RO75146 1068 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CAND2O75155 1236 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CXCL10P02778 98 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 LIG1P18858 919 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 GUCY2CP25092 1073 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CASP1P29466 404 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 GPC3P51654 580 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 POLGP54098 1239 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CACNB1Q02641 598 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 ZP2Q05996 745 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 RAD51AP2Q09MP3 1159 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 LAMTOR4Q0VGL1 99 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CAPSQ13938 189 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 GIT2Q14161 759 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 DHX8Q14562 1220 aaKnown RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 TPRNQ4KMQ1 711 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 FBXO47Q5MNV8 452 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 IER5Q5VY09 327 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CCDC73Q6ZRK6 1079 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 BMP8AQ7Z5Y6 402 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 GPBP1Q86WP2 473 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 GRAMD1CQ8IYS0 662 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 NME8Q8N427 588 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 MRPS27Q92552 414 aaKnown RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 LARP4BQ92615 738 aaKnown RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 STAMQ92783 540 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 DHX58Q96C10 678 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CDK5RAP3Q96JB5 506 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 FIZ1Q96SL8 496 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 REEP2Q9BRK0 252 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 CELF4Q9BZC1 486 aaKnown RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 POLR3FQ9H1D9 316 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-204ENST00000474665 TMX1Q9H3N1 280 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 LMBRD1Q9NUN5 540 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
LIMD1-204ENST00000474665 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms