RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 FTHL17Q9BXU8 183 aa17.4■□□□□ 0.38
COL1A1-204ENST00000474644 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
COL1A1-204ENST00000474644 MTIF3Q9H2K0 278 aaKnown RBP17.4■□□□□ 0.38
COL1A1-204ENST00000474644 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
COL1A1-204ENST00000474644 A0A1W2PPC1 479 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 EFCAB14O75071 495 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 GADD45BO75293 160 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-204ENST00000474644 FAM13AO94988 1023 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 SLFN14P0C7P3 912 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 CATSPER4Q7RTX7 472 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 ZBTB8OSQ8IWT0 167 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 SPIRE2Q8WWL2 714 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 TRIM9Q9C026 710 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 LRRC27Q9C0I9 530 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 CCDC113Q9H0I3 377 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 PARVGQ9HBI0 331 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 LARSQ9P2J5 1176 aaKnown RBP17.39■□□□□ 0.37
COL1A1-204ENST00000474644 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
COL1A1-204ENST00000474644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-204ENST00000474644 CCDC169A6NNP5 214 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 MGEA5O60502 916 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 TSPAN1O60635 241 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 KCNJ6P48051 423 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 PCBP1Q15365 356 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL1A1-204ENST00000474644 AMHR2Q16671 573 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 FAM43BQ6ZT52 329 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-204ENST00000474644 GRAMD1CQ8IYS0 662 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-204ENST00000474644 MYCT1Q8N699 235 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 KMT5AQ9NQR1 393 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 AGPAT5Q9NUQ2 364 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 ARHGAP28Q9P2N2 729 aa17.38■□□□□ 0.37
COL1A1-204ENST00000474644 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
COL1A1-204ENST00000474644 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 SLC16A4O15374 487 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 ERLIN2O94905 339 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 AFMP43652 599 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 EFNA5P52803 228 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 NCKAP1LP55160 1127 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 DEFB103AP81534 67 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 AMPD3Q01432 767 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 DSC3Q14574 896 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 CNNM4Q6P4Q7 775 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL1A1-204ENST00000474644 KRBA2Q6ZNG9 492 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 RTN4RL1Q86UN2 441 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-204ENST00000474644 ENGASEQ8NFI3 743 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
COL1A1-204ENST00000474644 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-204ENST00000474644 FZD8Q9H461 694 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 PHLPP2Q6ZVD8 1323 aa17.37■□□□□ 0.37
COL1A1-204ENST00000474644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-204ENST00000474644 FRMD3A2A2Y4 597 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 ENPP3O14638 875 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 B4GALT5O43286 388 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 ZNF202O95125 648 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 AMHP03971 560 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 PRKCBP05771 671 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 IDEP14735 1019 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 GAP43P17677 238 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 CASP1P29466 404 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 SMTNP53814 917 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
COL1A1-204ENST00000474644 SFR1Q86XK3 245 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 TMEM161BQ8NDZ6 487 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 FIZ1Q96SL8 496 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 SLC9A7Q96T83 725 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 ADAM2Q99965 735 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 C7orf25Q9BPX7 421 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 BLZF1Q9H2G9 400 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 RGS18Q9NS28 235 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-204ENST00000474644 CNTNAP2Q9UHC6 1331 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 MICAL3Q7RTP6 2002 aa17.36■□□□□ 0.37
COL1A1-204ENST00000474644 K7ENM7 598 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 TRAK2O60296 914 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
COL1A1-204ENST00000474644 EDN1P05305 212 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 ATP2A2P16615 1042 aaKnown RBP17.35■□□□□ 0.37
COL1A1-204ENST00000474644 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-204ENST00000474644 LIG1P18858 919 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 HOXA11P31270 313 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-204ENST00000474644 UBE2HP62256 183 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 ASIC1P78348 528 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 CUL4BQ13620 913 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 MAPK6Q16659 721 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 FAM187BQ17R55 369 aa17.35■□□□□ 0.37
COL1A1-204ENST00000474644 FAM109BQ6ICB4 259 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms