RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 PUS10Q3MIT2 529 aaKnown RBP20.7■□□□□ 0.9
CCDC171-206ENST00000474193 SPPL3Q8TCT6 385 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 PIGOQ8TEQ8 1089 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 PABPC5Q96DU9 382 aaKnown RBP20.7■□□□□ 0.9
CCDC171-206ENST00000474193 POLR3CQ9BUI4 534 aaPredicted RBP20.7■□□□□ 0.9
CCDC171-206ENST00000474193 TRAIPQ9BWF2 469 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 IFT122Q9HBG6 1241 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 LAD1O00515 517 aa20.69■□□□□ 0.9
CCDC171-206ENST00000474193 MUTP22033 750 aa20.69■□□□□ 0.9
CCDC171-206ENST00000474193 PPM1AP35813 382 aa20.69■□□□□ 0.9
CCDC171-206ENST00000474193 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
CCDC171-206ENST00000474193 FOXD4L5Q5VV16 416 aaPredicted RBP20.69■□□□□ 0.9
CCDC171-206ENST00000474193 POF1BQ8WVV4 589 aa20.69■□□□□ 0.9
CCDC171-206ENST00000474193 FOXD4L4Q8WXT5 416 aaPredicted RBP20.69■□□□□ 0.9
CCDC171-206ENST00000474193 CASD1Q96PB1 797 aa20.69■□□□□ 0.9
CCDC171-206ENST00000474193 CSPG5O95196 566 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 RPA1P27694 616 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 RARRES1P49788 294 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 POU5F1BQ06416 359 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 PDIA5Q14554 519 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 PDE12Q6L8Q7 609 aaKnown RBP20.68■□□□□ 0.9
CCDC171-206ENST00000474193 GLB1LQ6UWU2 654 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 CATSPER3Q86XQ3 398 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 COLGALT1Q8NBJ5 622 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 MCPH1Q8NEM0 835 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 ZNF558Q96NG5 402 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 CLDND1Q9NY35 253 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 LRWD1Q9UFC0 647 aa20.68■□□□□ 0.9
CCDC171-206ENST00000474193 DBR1Q9UK59 544 aaKnown RBP20.68■□□□□ 0.9
CCDC171-206ENST00000474193 FNDC1Q4ZHG4 1894 aaPredicted RBP20.67■□□□□ 0.9
CCDC171-206ENST00000474193 ZNF623O75123 536 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 FGF18O76093 207 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 AXLP30530 894 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 ALDH7A1P49419 539 aaKnown RBP20.67■□□□□ 0.9
CCDC171-206ENST00000474193 NUCB2P80303 420 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 RESTQ13127 1097 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 LEXMQ3ZCV2 418 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 CNNM3Q8NE01 707 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 HELQQ8TDG4 1101 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 IGFLR1Q9H665 355 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 AGPAT5Q9NUQ2 364 aa20.67■□□□□ 0.9
CCDC171-206ENST00000474193 FSD2A1L4K1 749 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 ARHGEF35A5YM69 484 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 INO80B-WBP1J3KQ70 363 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 USO1O60763 962 aaKnown RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 F13A1P00488 732 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 SPATA31C1P0DKV0 1188 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 CCT6AP40227 531 aaKnown RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 FXR2P51116 673 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 PTENP60484 403 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 RNASELQ05823 741 aaKnown RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 PTGDRQ13258 359 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 KCNT2Q6UVM3 1135 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 ZNF598Q86UK7 904 aaKnown RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 ZNF396Q96N95 335 aaPredicted RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 IPO9Q96P70 1041 aaKnown RBP20.66■□□□□ 0.9
CCDC171-206ENST00000474193 CWH43Q9H720 699 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 TLR9Q9NR96 1032 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 SPG21Q9NZD8 308 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 LZTS1Q9Y250 596 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 ATP6V1DQ9Y5K8 247 aa20.66■□□□□ 0.9
CCDC171-206ENST00000474193 MED24O75448 989 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 BMP15O95972 392 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 ARL2P36404 184 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 TOB1P50616 345 aaPredicted RBP20.65■□□□□ 0.9
CCDC171-206ENST00000474193 KRT79Q5XKE5 535 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 DTHD1Q6ZMT9 781 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 HACE1Q8IYU2 909 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 URGCPQ8TCY9 931 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 UBN1Q9NPG3 1134 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 XPNPEP1Q9NQW7 623 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 KANSL3Q9P2N6 904 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 PCDHB6Q9Y5E3 794 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 PCDHB2Q9Y5E7 798 aa20.65■□□□□ 0.9
CCDC171-206ENST00000474193 TCF20Q9UGU0 1960 aaKnown RBP20.65■□□□□ 0.9
CCDC171-206ENST00000474193 MYO7AQ13402 2215 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 BRD1O95696 1058 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 PLCB3Q01970 1234 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 PKP1Q13835 747 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 NBR1Q14596 966 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 CLLU1OSQ5K130 101 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 NOTUMQ6P988 496 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 MAEAQ7L5Y9 396 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 ZBTB8OSQ8IWT0 167 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 MRPS27Q92552 414 aaKnown RBP20.64■□□□□ 0.89
CCDC171-206ENST00000474193 CCDC51Q96ER9 411 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 FAM193BQ96PV7 902 aaPredicted RBP20.64■□□□□ 0.89
CCDC171-206ENST00000474193 POLR3FQ9H1D9 316 aaPredicted RBP20.64■□□□□ 0.89
CCDC171-206ENST00000474193 TLE6Q9H808 572 aa20.64■□□□□ 0.89
CCDC171-206ENST00000474193 CNTNAP2Q9UHC6 1331 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 A0A087WWV3 80 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 PRPHP41219 470 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 HYAL1Q12794 435 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 NOMO2Q5JPE7 1267 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 PTCRAQ6ISU1 281 aaPredicted RBP20.63■□□□□ 0.89
CCDC171-206ENST00000474193 LRRC55Q6ZSA7 311 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 IFNLR1Q8IU57 520 aaPredicted RBP20.63■□□□□ 0.89
CCDC171-206ENST00000474193 NFKBIZQ9BYH8 718 aa20.63■□□□□ 0.89
CCDC171-206ENST00000474193 TRIM6Q9C030 488 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms