RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SNX27Q96L92 541 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 GDAP1L1Q96MZ0 367 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 TRIM5Q9C035 493 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 FAM192AQ9GZU8 254 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 OSBPL5Q9H0X9 879 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 GOLPH3LQ9H4A5 285 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 PDE11AQ9HCR9 933 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 HELLSQ9NRZ9 838 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 KLHL3Q9UH77 587 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 LUC7L2Q9Y383 392 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ZDHHC9Q9Y397 364 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ASB3Q9Y575 518 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 BZW2Q9Y6E2 419 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 SBF2Q86WG5 1849 aa7.96□□□□□ -1.13
GPNMB-209ENST00000474157 WDR90Q96KV7 1748 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 BUB1BO60566 1050 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 DIAPH2O60879 1101 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 DNAJA2O60884 412 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 HMGB2P26583 209 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 NOS3P29474 1203 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 S100A5P33763 92 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 IREB2P48200 963 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 ACADVLP49748 655 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 GNAQP50148 359 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CBX3Q13185 183 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 TUBA3CQ13748 450 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 SPIDRQ14159 915 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 MBTPS1Q14703 1052 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 TRIM71Q2Q1W2 868 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 TMEM201Q5SNT2 666 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 ARMC3Q5W041 872 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 OVOS1Q6IE37 1185 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 Q6ZS46 218 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 DPH6Q7L8W6 267 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 SAPCD2Q86UD0 394 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 NSUN7Q8NE18 718 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 OR6P1Q8NGX9 317 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 ACMSDQ8TDX5 336 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 TMEM40Q8WWA1 233 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 MAIP1Q8WWC4 291 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 WFDC12Q8WWY7 111 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CTNNBL1Q8WYA6 563 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CDK19Q9BWU1 502 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CAPS2Q9BXY5 557 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 RTFDC1Q9BY42 306 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CEP41Q9BYV8 373 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 LNPKQ9C0E8 428 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 MIS12Q9H081 205 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC68Q9H2F9 335 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 DHX36Q9H2U1 1008 aaKnown RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 GSX1Q9H4S2 264 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-209ENST00000474157 FAM204AQ9H8W3 233 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 SLC40A1Q9NP59 571 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 FAM105AQ9NUU6 356 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 GMIPQ9P107 970 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 ADAM30Q9UKF2 790 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 CEP131Q9UPN4 1083 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 SATB2Q9UPW6 733 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 C15orf41Q9Y2V0 281 aa7.96□□□□□ -1.14
GPNMB-209ENST00000474157 TOPAZ1Q8N9V7 1692 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 TMEM247A6NEH6 219 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 EIF3HO15372 352 aaKnown RBP eCLIP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CYP27B1O15528 508 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 GAS2O43903 313 aaKnown RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 RNGTTO60942 597 aaKnown RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 PEX14O75381 377 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 WDHD1O75717 1129 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 FLOT1O75955 427 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 GHRP10912 638 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CPA3P15088 417 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ALOX15P16050 662 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 POLR2EP19388 210 aaKnown RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 HSPA4P34932 840 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 KRT9P35527 623 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CCT5P48643 541 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 PMS2P54278 862 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 PDE1BQ01064 536 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 KIF5AQ12840 1032 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 XRCC4Q13426 336 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CUL4AQ13619 759 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ADGRE1Q14246 886 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 SEPT2Q15019 361 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 WDR43Q15061 677 aaKnown RBP eCLIP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 NXNQ6DKJ4 435 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 CYB5D1Q6P9G0 228 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ITPRIPQ8IWB1 547 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 FUKQ8N0W3 1084 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 SYT2Q8N9I0 419 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 GABPB2Q8TAK5 448 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ZNF507Q8TCN5 953 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 IFT81Q8WYA0 676 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ISL2Q96A47 359 aa7.95□□□□□ -1.14
GPNMB-209ENST00000474157 ABHD8Q96I13 439 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms