RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	RUFY4	Q6ZNE9	571 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TSHZ1	Q6ZSZ6	1077 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	SLFN12	Q8IYM2	578 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	LINC00301	Q8NCQ3	95 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	ATP8B4	Q8TF62	1192 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	MRPS27	Q92552	414 aa	Known RBP	11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	USP28	Q96RU2	1077 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	AAAS	Q9NRG9	546 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NRBP2	Q9NSY0	501 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TUBE1	Q9UJT0	475 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NOL7	Q9UMY1	257 aa	Known RBP	11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PCDHA12	Q9UN75	941 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	CDY2A	Q9Y6F7	541 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	COL4A6	Q14031	1691 aa		11.11	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	CACNA1H	O95180	2353 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	EML1	O00423	815 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	SPTLC2	O15270	562 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	HBP1	O60381	514 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	LIG1	P18858	919 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	KLRC1	P26715	233 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	MRPS6	P82932	125 aa	Known RBP	11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	SLC39A14	Q15043	492 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RILPL1	Q5EBL4	403 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NCAPH2	Q6IBW4	605 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	B3GNT9	Q6UX72	402 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NPAS4	Q8IUM7	802 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TIGD1	Q96MW7	591 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NAT10	Q9H0A0	1025 aa	Known RBP	11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TTC12	Q9H892	705 aa	Predicted RBP	11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RC3H2	Q9HBD1	1191 aa	Known RBP	11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	USP25	Q9UHP3	1055 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	VAV3	Q9UKW4	847 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	CEP131	Q9UPN4	1083 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PCDHB7	Q9Y5E2	793 aa		11.1	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TTC3	P53804	2025 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	GOLGA6L6	A8MZA4	724 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	ZNF862	O60290	1169 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RPLP2	P05387	115 aa	Known RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	ATF7	P17544	494 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	CMA1	P23946	247 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	MSN	P26038	577 aa	Known RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NUBP1	P53384	320 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TYRO3	Q06418	890 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	MGAT3	Q09327	533 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TMEM62	Q0P6H9	643 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	NFX1	Q12986	1120 aa	Known RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PAK2	Q13177	524 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PPP2R5C	Q13362	524 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	UGCG	Q16739	394 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PTPN21	Q16825	1174 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	ZNF484	Q5JVG2	852 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TTC38	Q5R3I4	469 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	MTHFD1L	Q6UB35	978 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	METTL13	Q8N6R0	699 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RDM1	Q8NG50	284 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	BBX	Q8WY36	941 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	CCDC34	Q96HJ3	373 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RIPOR3	Q96MK2	946 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	TMEM60	Q9H2L4	133 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	AGO3	Q9H9G7	860 aa	Known RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RNF216	Q9NWF9	866 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	RGL1	Q9NZL6	768 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	PCDHGC5	Q9Y5F6	944 aa		11.09	□□□□□ -0.63
PPP2R1A-208	ENST00000473820	SPTBN4	Q9H254	2564 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	RIF1	Q5UIP0	2472 aa	Known RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	FAM237A	A0A1B0GTK4	181 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	OAT	P04181	439 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	SP100	P23497	879 aa	Predicted RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	TEC	P42680	631 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	TRAPPC10	P48553	1259 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	GATM	P50440	423 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	TOB1	P50616	345 aa	Predicted RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	PRKCE	Q02156	737 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	UBE3A	Q05086	875 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	EPHA7	Q15375	998 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	ZRSR1	Q15695	479 aa	Known RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	STX1A	Q16623	288 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	TPH2	Q8IWU9	490 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	THNSL1	Q8IYQ7	743 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	RNF214	Q8ND24	703 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	ENGASE	Q8NFI3	743 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	ASIC4	Q96FT7	647 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	FAM167A	Q96KS9	214 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	MTMR9	Q96QG7	549 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	SH2D3A	Q9BRG2	576 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	APOL5	Q9BWW9	433 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	ANO10	Q9NW15	660 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	PUF60	Q9UHX1	559 aa	Known RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	HOOK1	Q9UJC3	728 aa	Known RBP	11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	PADI3	Q9ULW8	664 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	PCDHA2	Q9Y5H9	948 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	IGSF9B	Q9UPX0	1349 aa		11.08	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	SMIM35	A0A1B0GVV1	85 aa		11.07	□□□□□ -0.64
PPP2R1A-208	ENST00000473820	TMEM150B	A6NC51	233 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms