RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CLCN4P51793 760 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 POLGP54098 1239 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 TDGQ13569 410 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 ANGPT1Q15389 498 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 TWF2Q6IBS0 349 aaKnown RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 AGMOQ6ZNB7 445 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 CCDC105Q8IYK2 499 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 DTWD2Q8NBA8 298 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 TRAIPQ9BWF2 469 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 MRPL9Q9BYD2 267 aaKnown RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 NIFKQ9BYG3 293 aaKnown RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 GLT8D2Q9H1C3 349 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 FAM105AQ9NUU6 356 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 DZANK1Q9NVP4 752 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
TRAF4-209ENST00000473421 COL4A3Q01955 1670 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 PSMD10O75832 226 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 CFHP08603 1231 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 ID4P47928 161 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 NTRK3Q16288 839 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 UBXN11Q5T124 520 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 B3GNT9Q6UX72 402 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-209ENST00000473421 MINDY3Q9H8M7 445 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 C6orf50Q9HD87 102 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 DACT1Q9NYF0 836 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 VPS54Q9P1Q0 977 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-209ENST00000473421 SEPT9Q9UHD8 586 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-209ENST00000473421 DUSP12Q9UNI6 340 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 R4GN57 208 aa14.21□□□□□ -0.13
TRAF4-209ENST00000473421 DOCK6Q96HP0 2047 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 DOCK8Q8NF50 2099 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 C2CD2LO14523 706 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 PRPF3O43395 683 aaKnown RBP14.2□□□□□ -0.14
TRAF4-209ENST00000473421 GAS7O60861 476 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 ZNF623O75123 536 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 RFPL2O75678 378 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 TDP2O95551 362 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 SPATA31D3P0C874 917 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 KLRC2P26717 231 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 FOXK2Q01167 660 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 LETM2Q2VYF4 491 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 LRCH2Q5VUJ6 765 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 GLB1LQ6UWU2 654 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 SPATA31D4Q6ZUB0 917 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 CCDC149Q6ZUS6 474 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 ANO5Q75V66 913 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 RHPN2Q8IUC4 686 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 RIN2Q8WYP3 895 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-209ENST00000473421 RMDN1Q96DB5 314 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 MYADMQ96S97 322 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 RIT2Q99578 217 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 SFXN1Q9H9B4 322 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 MARCH5Q9NX47 278 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 WRAP73Q9P2S5 460 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-209ENST00000473421 TCEAL9Q9UHQ7 104 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 PCDHB2Q9Y5E7 798 aa14.2□□□□□ -0.14
TRAF4-209ENST00000473421 CACNA1AO00555 2505 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 MED19A0JLT2 244 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-209ENST00000473421 EML1O00423 815 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 NRP1O14786 923 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 POMCP01189 267 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 HOXA11P31270 313 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-209ENST00000473421 NPEPPSP55786 919 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 RNASELQ05823 741 aaKnown RBP14.19□□□□□ -0.14
TRAF4-209ENST00000473421 Q6ZUG5 572 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 OTOP3Q7RTS5 596 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 TMEM87AQ8NBN3 555 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 BRF1Q92994 677 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 B3GALT6Q96L58 329 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 NLRP4Q96MN2 994 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
TRAF4-209ENST00000473421 MIOSQ9NXC5 875 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 FBXL21Q9UKT6 434 aa14.19□□□□□ -0.14
TRAF4-209ENST00000473421 DDX11L8A8MPP1 907 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 DTNBO60941 627 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 MAFO75444 373 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-209ENST00000473421 EFEMP2O95967 443 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 XKR3Q5GH77 459 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 MIER3Q7Z3K6 550 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 MRPL10Q7Z7H8 261 aaKnown RBP14.18□□□□□ -0.14
TRAF4-209ENST00000473421 SLC44A3Q8N4M1 653 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 TBCKQ8TEA7 893 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 ZNF707Q96C28 371 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-209ENST00000473421 ACSF2Q96CM8 615 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-209ENST00000473421 TEKT3Q9BXF9 490 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 MAN1C1Q9NR34 630 aa14.18□□□□□ -0.14
TRAF4-209ENST00000473421 BMP2KQ9NSY1 1161 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-209ENST00000473421 CA14Q9ULX7 337 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms