RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TWF2Q6IBS0 349 aaKnown RBP15.16■□□□□ 0.02
CHD3-209ENST00000473376 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 RHPN2Q8IUC4 686 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
CHD3-209ENST00000473376 GJA10Q969M2 543 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 DZANK1Q9NVP4 752 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 HCFC2Q9Y5Z7 792 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 TMEM221A6NGB7 291 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 M0R296 226 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 EML1O00423 815 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 SLC37A4O43826 429 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 OFD1O75665 1012 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 CSPG5O95196 566 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 LYPLA2O95372 231 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
CHD3-209ENST00000473376 C1RP00736 705 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 CTSAP10619 480 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 AXLP30530 894 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 NOMO2Q5JPE7 1267 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 PPFIBP1Q86W92 1011 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 HAS1Q92839 578 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 ZBP1Q9H171 429 aa15.15■□□□□ 0.02
CHD3-209ENST00000473376 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
CHD3-209ENST00000473376 INPPL1O15357 1258 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 GALTP07902 379 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 YWHABP31946 246 aaKnown RBP15.14■□□□□ 0.01
CHD3-209ENST00000473376 MTHFRP42898 656 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
CHD3-209ENST00000473376 PTPN21Q16825 1174 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CHD3-209ENST00000473376 UBALD2Q8IYN6 164 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 CEP170P1Q96L14 293 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 RIPOR3Q96MK2 946 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 NFKBIZQ9BYH8 718 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 IRF2BPLQ9H1B7 796 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 KCNJ14Q9UNX9 436 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
CHD3-209ENST00000473376 ZNF318Q5VUA4 2279 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 CCNT1O60563 726 aaKnown RBP15.13■□□□□ 0.01
CHD3-209ENST00000473376 CLASP2O75122 1294 aaKnown RBP15.13■□□□□ 0.01
CHD3-209ENST00000473376 CXCL14O95715 111 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHD3-209ENST00000473376 FGFR4P22455 802 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 NHLH1Q02575 133 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 SPIRE1Q08AE8 756 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 STK3Q13188 491 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 SUGP1Q8IWZ8 645 aaKnown RBP15.13■□□□□ 0.01
CHD3-209ENST00000473376 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 FBXL6Q8N531 539 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
CHD3-209ENST00000473376 PBXIP1Q96AQ6 731 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 ZNF668Q96K58 619 aaPredicted RBP15.13■□□□□ 0.01
CHD3-209ENST00000473376 NLRP4Q96MN2 994 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 LXNQ9BS40 222 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 NRDE2Q9H7Z3 1164 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 SSX2IPQ9Y2D8 614 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 PCDHB2Q9Y5E7 798 aa15.13■□□□□ 0.01
CHD3-209ENST00000473376 TECTAO75443 2155 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 TMEM150BA6NC51 233 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHD3-209ENST00000473376 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 HOXA11P31270 313 aaPredicted RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 PBX3P40426 434 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 RBM10P98175 930 aaKnown RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 RNASELQ05823 741 aaKnown RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 FERMT3Q86UX7 667 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 GPR65Q8IYL9 337 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 HSD17B14Q9BPX1 270 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
CHD3-209ENST00000473376 ORC3Q9UBD5 711 aaPredicted RBP15.12■□□□□ 0.01
CHD3-209ENST00000473376 TRIOO75962 3097 aa15.11■□□□□ 0.01
CHD3-209ENST00000473376 MARCH6O60337 910 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms