RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TRIM49P0CI25 452 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 TRIM49CP0CI26 452 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 FGFR4P22455 802 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 CBWD6Q4V339 395 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 CBWD3Q5JTY5 395 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 CBWD5Q5RIA9 395 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 TRPM8Q7Z2W7 1104 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 TBC1D1Q86TI0 1168 aaPredicted RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 STMN4Q9H169 189 aaPredicted RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 OLFML3Q9NRN5 406 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 SLC12A4Q9UP95 1085 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM86B1E9PN63 330 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 LRRN2O75325 713 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM86B2P0C5J1 330 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 HSPA6P17066 643 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 SNAP25P60880 206 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 COG2Q14746 738 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 UBAP2Q5T6F2 1119 aaKnown RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 RINT1Q6NUQ1 792 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 FMNL3Q8IVF7 1028 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 KSR1Q8IVT5 923 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 RHOT2Q8IXI1 618 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 PIGOQ8TEQ8 1089 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM20AQ96MK3 541 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 ATP6V0A4Q9HBG4 840 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 APEX2Q9UBZ4 518 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 ZMYM2Q9UBW7 1377 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 C6orf229H3BNL8 230 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 PODXLO00592 558 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 GBP1P32455 592 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 PRELID2Q8N945 189 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 LENG9Q96B70 501 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MTFR1LQ9H019 292 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 FRMD4BQ9Y2L6 1034 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MIF4GDA9UHW6 222 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 RASGRF2O14827 1237 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 EIF3DO15371 548 aaKnown RBP eCLIP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 SLURP2P0DP57 97 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 POLD1P28340 1107 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 GBP2P32456 591 aaPredicted RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 ZNF76P36508 570 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 CLNS1AP54105 237 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MYL7Q01449 175 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 HS2ST1Q7LGA3 356 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 CRYGNQ8WXF5 182 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 KRT35Q92764 455 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 AGPAT1Q99943 283 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MSH4O15457 936 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 HLA-DOAP06340 250 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 RPSAP08865 295 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MARCKSL1P49006 195 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 CTTNQ14247 550 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 USH1GQ495M9 461 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 SLFN13Q68D06 897 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 CCDC137Q6PK04 289 aaKnown RBP15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 TAOK1Q7L7X3 1001 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 DYDC1Q8WWB3 177 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 MKNK1Q9BUB5 465 aa15.36■□□□□ 0.05
NHLRC3-204ENST00000473371 FRMPD4Q14CM0 1322 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 SCP2P22307 547 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 SLMAPQ14BN4 828 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 TTC27Q6P3X3 843 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 CCDC134Q9H6E4 229 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 ABCF3Q9NUQ8 709 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 CD2APQ9Y5K6 639 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 CFAP73A6NFT4 308 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 FOXN3O00409 490 aaPredicted RBP15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 EML1O00423 815 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 RIPK2O43353 540 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 POLLQ9UGP5 575 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 PCYOX1Q9UHG3 505 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 CCNL1Q9UK58 526 aaPredicted RBP15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 VAV3Q9UKW4 847 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 FOCADQ5VW36 1801 aa15.35■□□□□ 0.05
NHLRC3-204ENST00000473371 FTLP02792 175 aaPredicted RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 AUHQ13825 339 aaKnown RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 CCDC105Q8IYK2 499 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 MIEF2Q96C03 454 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 ZSWIM1Q9BR11 485 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 TMEM109Q9BVC6 243 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 AMNQ9BXJ7 453 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 CTNNA2P26232 953 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 MESDQ14696 234 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 KIF22Q14807 665 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms