RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CYP2C19P33261 490 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 MAPKAPK2P49137 400 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 GRIN1Q05586 938 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 TMEM62Q0P6H9 643 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 DBPQ10586 325 aaPredicted RBP7.26□□□□□ -1.25
CKS1B-204ENST00000471245 KCNMB1Q16558 191 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 TTC38Q5R3I4 469 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 RPTNQ6XPR3 784 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 FAM126BQ8IXS8 530 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 FAM168AQ92567 244 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 HSPBAP1Q96EW2 488 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 FOXB1Q99853 325 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 RXFP1Q9HBX9 757 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 ZNF277Q9NRM2 450 aaPredicted RBP7.26□□□□□ -1.25
CKS1B-204ENST00000471245 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
CKS1B-204ENST00000471245 METP08581 1390 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 GOLGA6L22H0YM25 854 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 PRPF3O43395 683 aaKnown RBP7.25□□□□□ -1.25
CKS1B-204ENST00000471245 MAP4K4O95819 1239 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-204ENST00000471245 PRLP01236 227 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 MTNR1BP49286 362 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 GALK1P51570 392 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 GTF2H3Q13889 308 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 ODF1Q14990 250 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 PLEKHN1Q494U1 663 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-204ENST00000471245 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-204ENST00000471245 CILP2Q8IUL8 1156 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 HIPK4Q8NE63 616 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 INTS4Q96HW7 963 aaKnown RBP7.25□□□□□ -1.25
CKS1B-204ENST00000471245 TEKT5Q96M29 485 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 DNAJC28Q9NX36 388 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 PPP2R3BQ9Y5P8 575 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 ANKRD50Q9ULJ7 1429 aa7.25□□□□□ -1.25
CKS1B-204ENST00000471245 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 MTHFD2P13995 350 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 AGXTP21549 392 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 MRPS9P82933 396 aaKnown RBP7.24□□□□□ -1.25
CKS1B-204ENST00000471245 ALDH6A1Q02252 535 aaKnown RBP7.24□□□□□ -1.25
CKS1B-204ENST00000471245 TCIRG1Q13488 830 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 CLUL1Q15846 466 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.24□□□□□ -1.25
CKS1B-204ENST00000471245 MINDY4Q4G0A6 757 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 TPH2Q8IWU9 490 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 TGFBRAP1Q8WUH2 860 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 TOE1Q96GM8 510 aaKnown RBP7.24□□□□□ -1.25
CKS1B-204ENST00000471245 RAX2Q96IS3 184 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 SEMA4AQ9H3S1 761 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 POFUT1Q9H488 388 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 GPR45Q9Y5Y3 372 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 PLCH1Q4KWH8 1693 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
CKS1B-204ENST00000471245 ZNF503-AS2A6NEH8 195 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 HRKO00198 91 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ELL2O00472 640 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ABLIM1O14639 778 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 PAX4O43316 350 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ZRANB2O95218 330 aaKnown RBP eCLIP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 HTRA3P83110 453 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 PRR5P85299 388 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 SRSF2Q01130 221 aaKnown RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ACAP2Q15057 778 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 UGT8Q16880 541 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ZBTB41Q5SVQ8 909 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ADGRF1Q5T601 910 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 CD276Q5ZPR3 534 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 KIAA1841Q6NSI8 718 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ZC3H14Q6PJT7 736 aaKnown RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 KCNK18Q7Z418 384 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 AMIGO3Q86WK7 504 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 DGKHQ86XP1 1220 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 JADE3Q92613 823 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 ERCC4Q92889 916 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 FERMT2Q96AC1 680 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 FMNL2Q96PY5 1086 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 TUBGCP5Q96RT8 1024 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 NGRNQ9NPE2 291 aaKnown RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-204ENST00000471245 RGPD1P0DJD0 1748 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 PXDNQ92626 1479 aa7.23□□□□□ -1.25
CKS1B-204ENST00000471245 KIF1BO60333 1816 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 NEXMIFQ5QGS0 1516 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 NWD2Q9ULI1 1742 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 ST20-MTHFSA0A0A6YYL1 179 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 ERC2O15083 957 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 PRPF6O94906 941 aaKnown RBP7.22□□□□□ -1.25
CKS1B-204ENST00000471245 IL33O95760 270 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 LRG1P02750 347 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 KRT18P05783 430 aaKnown RBP7.22□□□□□ -1.25
CKS1B-204ENST00000471245 LPOP22079 712 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-204ENST00000471245 PTGS1P23219 599 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 ROM1Q03395 351 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
CKS1B-204ENST00000471245 TEPPQ6URK8 271 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms