RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FAM96AQ9H5X1 160 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 GALNT8Q9NY28 637 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 ABT1Q9ULW3 272 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 PREX2Q70Z35 1606 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 WDR17Q8IZU2 1322 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MAPKBP1O60336 1514 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MYO1CO00159 1063 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 KRT38O76015 456 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 FAM107AO95990 144 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SMARCA1P28370 1054 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MRPS25P82663 173 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CNGA2Q16280 664 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 LRRC8AQ8IWT6 810 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SPRTNQ9H040 489 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SPATA2Q9UM82 520 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 DMRT2Q9Y5R5 561 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 HMGB3O15347 200 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 TJP3O95049 919 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CDH2P19022 906 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CLK1P49759 484 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 NME3Q13232 169 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 PPP2R5BQ15173 497 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CDC37Q16543 378 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 PPP1R2P3Q6NXS1 205 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 TMEM154Q6P9G4 183 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 RMDN1Q96DB5 314 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 HEMGNQ9BXL5 484 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 V9GYQ6 96 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 C16orf96A6NNT2 1141 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CHRNA3P32297 505 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SLFN13Q68D06 897 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 TMA16Q96EY4 203 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SPON2Q9BUD6 331 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CNGB3Q9NQW8 809 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CDC23Q9UJX2 597 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SOS1Q07889 1333 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 E7EWF7 191 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 M0R3G1 203 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MLNP12872 115 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 DARSP14868 501 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 ARFIP2P53365 341 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 LRRC36Q1X8D7 754 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MFSD14BQ5SR56 506 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SLFN12LQ6IEE8 588 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 ARMC6Q6NXE6 501 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 PPM1NQ8N819 430 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 PRPF18Q99633 342 aaKnown RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 MSTO1Q9BUK6 570 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 CUEDC2Q9H467 287 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF304Q9HCX3 659 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 OLFML3Q9NRN5 406 aa7.31□□□□□ -1.24
BRCA1-210ENST00000471181 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-210ENST00000471181 EPRSP07814 1512 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ANKRD65E5RJM6 399 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 SYNCRIPO60506 623 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 FEN1P39748 380 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ARF5P84085 180 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 MAPRE2Q15555 327 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PASD1Q8IV76 773 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 OR6P1Q8NGX9 317 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 TSSK1BQ9BXA7 367 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PCDH11XQ9BZA7 1347 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PCDH11YQ9BZA8 1340 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PIK3R2O00459 728 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KRT6AP02538 564 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KRT6BP04259 564 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 GAP43P17677 238 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ALDH1B1P30837 517 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 GUCA1AP43080 201 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KRT6CP48668 564 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CEBPAP49715 358 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CSNK2BP67870 215 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CBFBQ13951 182 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CNGA3Q16281 694 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CCDC144BQ3MJ40 725 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KRT39Q6A163 491 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 LPIN2Q92539 896 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KIFC1Q9BW19 673 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 TRPC7Q9HCX4 862 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 RPRD1BQ9NQG5 326 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 NFU1Q9UMS0 254 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 DENND3A2RUS2 1198 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KLRF2D3W0D1 207 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 XPO1O14980 1071 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ATP5HO75947 161 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 COX10Q12887 443 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KRT31Q15323 416 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 MTHFSDQ2M296 383 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CC2D1AQ6P1N0 951 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 APOA5Q6Q788 366 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 BTN2A1Q7KYR7 527 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 NANOGNBQ7Z5D8 188 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KIAA0825Q8IV33 1275 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 RABGGTAQ92696 567 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 VPS50Q96JG6 964 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PDCD10Q9BUL8 212 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ADAM21Q9UKJ8 722 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 TTC7AQ9ULT0 858 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms