RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CDC42EP1Q00587 391 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 TBC1D8BQ0IIM8 1120 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 MTMR3Q13615 1198 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 TARBP2Q15633 366 aaKnown RBP10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 KREMEN2Q8NCW0 462 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CCDC148Q8NFR7 591 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 FBXO18Q8NFZ0 1043 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 HELQQ8TDG4 1101 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 SLC5A5Q92911 643 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 APOL5Q9BWW9 433 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 ZBP1Q9H171 429 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CHST12Q9NRB3 414 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 DZANK1Q9NVP4 752 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CDH22Q9UJ99 828 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 IGKV6-21A0A0C4DH24 114 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 VPS37CA5D8V6 355 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-206ENST00000471037 PROB1E7EW31 1015 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 GFRA3O60609 400 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 GAS7O60861 476 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 BRD1O95696 1058 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 PDGFBP01127 241 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-206ENST00000471037 SP100P23497 879 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-206ENST00000471037 MTHFRP42898 656 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 USP11P51784 963 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 BCAR1P56945 870 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 GIT2Q14161 759 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 BMS1Q14692 1282 aaKnown RBP10.16□□□□□ -0.78
SF3A1-206ENST00000471037 UGCGQ16739 394 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 KIAA1841Q6NSI8 718 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 B3GNT9Q6UX72 402 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 RNF169Q8NCN4 708 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 RDM1Q8NG50 284 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 TMEM169Q96HH4 297 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 ZNF668Q96K58 619 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-206ENST00000471037 SNX27Q96L92 541 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 AIFM3Q96NN9 605 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 TEKT3Q9BXF9 490 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 FAM86C1Q9NVL1 165 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 MTMR6Q9Y217 621 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 USTQ9Y2C2 406 aa10.16□□□□□ -0.78
SF3A1-206ENST00000471037 WDR81Q562E7 1941 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 NT5C1B-RDH14C9J2C7 533 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 CHMP2AO43633 222 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 PSMD10O75832 226 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 ZSCAN22P10073 491 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 FGFR4P22455 802 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 SFPQP23246 707 aaKnown RBP eCLIP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 PHKA2P46019 1235 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 POLGP54098 1239 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 DRP2Q13474 957 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 PKP1Q13835 747 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 SAFBQ15424 915 aaKnown RBP eCLIP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 Q4G0T1 1027 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 XKR3Q5GH77 459 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 LRCH2Q5VUJ6 765 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 GALNT17Q6IS24 598 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 DDX53Q86TM3 631 aaKnown RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 ZNF410Q86VK4 478 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 TMEM173Q86WV6 379 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 ZDHHC14Q8IZN3 488 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 VPS52Q8N1B4 723 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 ATOH1Q92858 354 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-206ENST00000471037 UNC45AQ9H3U1 944 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 BRMS1Q9HCU9 246 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
SF3A1-206ENST00000471037 MYH15Q9Y2K3 1946 aa10.15□□□□□ -0.79
SF3A1-206ENST00000471037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 H0Y858 1186 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 ZNF623O75123 536 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 ZC3H11AO75152 810 aaKnown RBP eCLIP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 CSDE1O75534 798 aaKnown RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 STBD1O95210 358 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 CXCL14O95715 111 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 F13A1P00488 732 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 CTSAP10619 480 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 SKIP12755 728 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 RAB27AP51159 221 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 FOSBP53539 338 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 NLRP5P59047 1200 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 GUCY1B3Q02153 619 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 ATAT1Q5SQI0 421 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 GLB1LQ6UWU2 654 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 TDRD5Q8NAT2 981 aaKnown RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 IGSF21Q96ID5 467 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 PHF20Q9BVI0 1012 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 INO80BQ9C086 356 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 ZSCAN16Q9H4T2 348 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-206ENST00000471037 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
SF3A1-206ENST00000471037 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms