RNA–Protein interactions for RNA: ENST00000470838.1

CPA1-202, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-202ENST00000470838 SH2D3AQ9BRG2 576 aa20.53■□□□□ 0.88
CPA1-202ENST00000470838 IRF2BPLQ9H1B7 796 aa20.53■□□□□ 0.88
CPA1-202ENST00000470838 FAM105AQ9NUU6 356 aa20.53■□□□□ 0.88
CPA1-202ENST00000470838 SORCS3Q9UPU3 1222 aa20.53■□□□□ 0.88
CPA1-202ENST00000470838 RIF1Q5UIP0 2472 aaKnown RBP20.53■□□□□ 0.88
CPA1-202ENST00000470838 PTPRZ1P23471 2315 aaPredicted RBP20.53■□□□□ 0.88
CPA1-202ENST00000470838 MEIS3P2A8K0S8 358 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 DDX11L8A8MPP1 907 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 DEXIO95424 95 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 PDGFBP01127 241 aaPredicted RBP20.52■□□□□ 0.88
CPA1-202ENST00000470838 RAB27AP51159 221 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 PSMC5P62195 406 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 SSRP1Q08945 709 aaKnown RBP20.52■□□□□ 0.88
CPA1-202ENST00000470838 NOMO2Q5JPE7 1267 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 GLB1LQ6UWU2 654 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 MRPL10Q7Z7H8 261 aaKnown RBP20.52■□□□□ 0.88
CPA1-202ENST00000470838 TRIM22Q8IYM9 498 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 BCL7CQ8WUZ0 217 aaPredicted RBP20.52■□□□□ 0.88
CPA1-202ENST00000470838 LPPQ93052 612 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 JPH2Q9BR39 696 aaPredicted RBP20.52■□□□□ 0.88
CPA1-202ENST00000470838 VN1R3Q9BXE9 311 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 DZANK1Q9NVP4 752 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 USTQ9Y2C2 406 aa20.52■□□□□ 0.88
CPA1-202ENST00000470838 EML1O00423 815 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 LILRB3O75022 631 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 BRD1O95696 1058 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 TWF2Q6IBS0 349 aaKnown RBP20.51■□□□□ 0.87
CPA1-202ENST00000470838 KIAA1841Q6NSI8 718 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 RHPN2Q8IUC4 686 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 KSR1Q8IVT5 923 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 KCNMB3Q9NPA1 279 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 VPS13AQ96RL7 3174 aa20.51■□□□□ 0.87
CPA1-202ENST00000470838 B4GALT3O60512 393 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 ZC3H11AO75152 810 aaKnown RBP eCLIP20.5■□□□□ 0.87
CPA1-202ENST00000470838 REC8O95072 547 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 EPCAMP16422 314 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 HOXA11P31270 313 aaPredicted RBP20.5■□□□□ 0.87
CPA1-202ENST00000470838 MTMR3Q13615 1198 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 ATAT1Q5SQI0 421 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 C12orf76Q8N812 135 aaPredicted RBP20.5■□□□□ 0.87
CPA1-202ENST00000470838 AUTS2Q8WXX7 1259 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 FAM20AQ96MK3 541 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 TM6SF1Q9BZW5 370 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 DHX33Q9H6R0 707 aaKnown RBP20.5■□□□□ 0.87
CPA1-202ENST00000470838 CYP26B1Q9NR63 512 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 AGPAT5Q9NUQ2 364 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 VAV3Q9UKW4 847 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 PIN4Q9Y237 131 aaKnown RBP20.5■□□□□ 0.87
CPA1-202ENST00000470838 PPME1Q9Y570 386 aa20.5■□□□□ 0.87
CPA1-202ENST00000470838 ST18O60284 1047 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 SP100P23497 879 aaPredicted RBP20.49■□□□□ 0.87
CPA1-202ENST00000470838 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
CPA1-202ENST00000470838 NONOQ15233 471 aaKnown RBP eCLIP20.49■□□□□ 0.87
CPA1-202ENST00000470838 PPP4R3AQ6IN85 833 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 CATSPER4Q7RTX7 472 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 ZNF280BQ86YH2 543 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 ZNF579Q8NAF0 562 aaKnown RBP20.49■□□□□ 0.87
CPA1-202ENST00000470838 PGBD4Q96DM1 585 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 TSHZ2Q9NRE2 1034 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 DNAJB4Q9UDY4 337 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 STK39Q9UEW8 545 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 DDX25Q9UHL0 483 aaKnown RBP20.49■□□□□ 0.87
CPA1-202ENST00000470838 PCDHB2Q9Y5E7 798 aa20.49■□□□□ 0.87
CPA1-202ENST00000470838 WDR87Q6ZQQ6 2873 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.48■□□□□ 0.87
CPA1-202ENST00000470838 PROB1E7EW31 1015 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 GALR2O43603 387 aaPredicted RBP20.48■□□□□ 0.87
CPA1-202ENST00000470838 SLC37A4O43826 429 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 SLC11A1P49279 550 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 NPEPPSP55786 919 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 PTPN14Q15678 1187 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 RARS2Q5T160 578 aaKnown RBP20.48■□□□□ 0.87
CPA1-202ENST00000470838 KANK3Q6NY19 840 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 ZBTB33Q86T24 672 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 EXOC8Q8IYI6 725 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 PLCD3Q8N3E9 789 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 AIFM3Q96NN9 605 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 MINDY3Q9H8M7 445 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 WRAP73Q9P2S5 460 aaPredicted RBP20.48■□□□□ 0.87
CPA1-202ENST00000470838 COL4A3BPQ9Y5P4 624 aa20.48■□□□□ 0.87
CPA1-202ENST00000470838 DKC1O60832 514 aaKnown RBP eCLIP20.47■□□□□ 0.87
CPA1-202ENST00000470838 DDHD2O94830 711 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 EFEMP2O95967 443 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 P4HBP07237 508 aaKnown RBP20.47■□□□□ 0.87
CPA1-202ENST00000470838 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
CPA1-202ENST00000470838 INF2Q27J81 1249 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 UBXN11Q5T124 520 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 PLA2G4FQ68DD2 849 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 GPR149Q86SP6 731 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 PRPF31Q8WWY3 499 aaKnown RBP20.47■□□□□ 0.87
CPA1-202ENST00000470838 NLRP4Q96MN2 994 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 TMEM175Q9BSA9 504 aa20.47■□□□□ 0.87
CPA1-202ENST00000470838 KANSL3Q9P2N6 904 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms