RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 HERC4Q5GLZ8 1057 aaPredicted RBP12.91□□□□□ -0.34
HLA-C-206ENST00000470363 CLLU1OSQ5K130 101 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
HLA-C-206ENST00000470363 ANO5Q75V66 913 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 RBM23Q86U06 439 aaKnown RBP12.91□□□□□ -0.34
HLA-C-206ENST00000470363 SUSD6Q92537 303 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 S1PR5Q9H228 398 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 TLE6Q9H808 572 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 VAV3Q9UKW4 847 aa12.91□□□□□ -0.34
HLA-C-206ENST00000470363 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
HLA-C-206ENST00000470363 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 LOC730098B7Z3J9 87 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 LAG3P18627 525 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 FGFR4P22455 802 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 PPP2R5CQ13362 524 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 STK38Q15208 465 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 RNF135Q8IUD6 432 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 LEO1Q8WVC0 666 aaPredicted RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 HAS1Q92839 578 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 PPP2R3CQ969Q6 453 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 WRAP73Q9P2S5 460 aaPredicted RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 BARX2Q9UMQ3 279 aaPredicted RBP12.9□□□□□ -0.34
HLA-C-206ENST00000470363 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
HLA-C-206ENST00000470363 WDR81Q562E7 1941 aa12.9□□□□□ -0.35
HLA-C-206ENST00000470363 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 HOXA2O43364 376 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 IBSPP21815 317 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 MCM7P33993 719 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 NDUFV1P49821 464 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 PTPAQ15257 358 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 LETM2Q2VYF4 491 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 POP1Q99575 1024 aaKnown RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 CDCA3Q99618 268 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 IFT122Q9HBG6 1241 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 DDX25Q9UHL0 483 aaKnown RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 HCN4Q9Y3Q4 1203 aa12.89□□□□□ -0.35
HLA-C-206ENST00000470363 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-206ENST00000470363 A0A087WZ62 844 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 ZNF623O75123 536 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 PBX3P40426 434 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 PSMC5P62195 406 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 SLC39A11Q8N1S5 342 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 LRRC43Q8N309 656 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-206ENST00000470363 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
HLA-C-206ENST00000470363 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 TBX3O15119 743 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 CCNT1O60563 726 aaKnown RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 PHKA2P46019 1235 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 NPEPPSP55786 919 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 HFE2Q6ZVN8 426 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 ZNF410Q86VK4 478 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 KSR1Q8IVT5 923 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 EDAQ92838 391 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms