RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 E9PMD0 336 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 STX6O43752 255 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 EYA4O95677 639 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 SKIP12755 728 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 SF3A1Q15459 793 aaKnown RBP15.69■□□□□ 0.1
TOP3B-215ENST00000470338 NAALADL2Q58DX5 795 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 TWF2Q6IBS0 349 aaKnown RBP15.69■□□□□ 0.1
TOP3B-215ENST00000470338 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 HSCBQ8IWL3 235 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.69■□□□□ 0.1
TOP3B-215ENST00000470338 KCTD17Q8N5Z5 321 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
TOP3B-215ENST00000470338 AK8Q96MA6 479 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 C11orf84Q9BUA3 381 aaPredicted RBP15.69■□□□□ 0.1
TOP3B-215ENST00000470338 FAM105AQ9NUU6 356 aa15.69■□□□□ 0.1
TOP3B-215ENST00000470338 SLC26A4O43511 780 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 AXLP30530 894 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 RAB27AP51159 221 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 MBTD1Q05BQ5 628 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 AMHR2Q16671 573 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 CLLU1OSQ5K130 101 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 MRPL10Q7Z7H8 261 aaKnown RBP15.68■□□□□ 0.1
TOP3B-215ENST00000470338 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 PNMA5Q96PV4 448 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-215ENST00000470338 CWH43Q9H720 699 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 PRDM6Q9NQX0 595 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
TOP3B-215ENST00000470338 BRWD1Q9NSI6 2320 aa15.68■□□□□ 0.1
TOP3B-215ENST00000470338 INO80B-WBP1J3KQ70 363 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 TSPAN1O60635 241 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 ERLIN2O94905 339 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 PTPAQ15257 358 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 PTPROQ16827 1216 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 CDCA2Q69YH5 1023 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-215ENST00000470338 FAM173BQ6P4H8 233 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 LRRC55Q6ZSA7 311 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 RSPH1Q8WYR4 309 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 BSNDQ8WZ55 320 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 LMAN2LQ9H0V9 348 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 PLAGL2Q9UPG8 496 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 CLIC4Q9Y696 253 aa15.67■□□□□ 0.1
TOP3B-215ENST00000470338 SPTBN5Q9NRC6 3674 aaKnown RBP15.66■□□□□ 0.1
TOP3B-215ENST00000470338 LRRIQ4A6NIV6 560 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 GRM6O15303 877 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 ITGB1P05556 798 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 LONP1P36776 959 aaKnown RBP15.66■□□□□ 0.1
TOP3B-215ENST00000470338 NAMPTP43490 491 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
TOP3B-215ENST00000470338 FAM187BQ17R55 369 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 TMEM119Q4V9L6 283 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 RINT1Q6NUQ1 792 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 C1orf186Q6ZWK4 172 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 CABP7Q86V35 215 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 ABI1Q8IZP0 508 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 KLHL23Q8NBE8 558 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 HELQQ8TDG4 1101 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 CCDC51Q96ER9 411 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 FZD8Q9H461 694 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 AAASQ9NRG9 546 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 HCSTQ9UBK5 93 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 PCDHB12Q9Y5F1 795 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 XIRP2A4UGR9 3374 aa15.66■□□□□ 0.1
TOP3B-215ENST00000470338 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
TOP3B-215ENST00000470338 ARF4P18085 180 aaPredicted RBP15.65■□□□□ 0.1
TOP3B-215ENST00000470338 GRIN1Q05586 938 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 CAMK1Q14012 370 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 PPP2R5AQ15172 486 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 NOTUMQ6P988 496 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 LRRC43Q8N309 656 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 SYT2Q8N9I0 419 aaPredicted RBP15.65■□□□□ 0.1
TOP3B-215ENST00000470338 COLGALT1Q8NBJ5 622 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 CNNM3Q8NE01 707 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 LPPQ93052 612 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 PGBD4Q96DM1 585 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 CPB2Q96IY4 423 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 PRIMPOLQ96LW4 560 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 C2orf40Q9H1Z8 148 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 POLD4Q9HCU8 107 aa15.65■□□□□ 0.1
TOP3B-215ENST00000470338 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
TOP3B-215ENST00000470338 MORC2Q9Y6X9 1032 aaPredicted RBP15.65■□□□□ 0.1
TOP3B-215ENST00000470338 TDRD15B5MCY1 1934 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 A0A1B0GUA9 196 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 MEIS3P2A8K0S8 358 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 OFD1O75665 1012 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 LAG3P18627 525 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 UBA7P41226 1012 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
TOP3B-215ENST00000470338 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
TOP3B-215ENST00000470338 TIGD5Q53EQ6 642 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms