RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 HIST1H2AJQ99878 128 aa7.7□□□□□ -1.18
COL11A1-208ENST00000470170 SUV39H1O43463 412 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 MCM7P33993 719 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 ELOA2Q8IYF1 753 aaPredicted RBP7.69□□□□□ -1.18
COL11A1-208ENST00000470170 PPM1KQ8N3J5 372 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 FERMT2Q96AC1 680 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 UIMC1Q96RL1 719 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 OSBPL6Q9BZF3 934 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
COL11A1-208ENST00000470170 SPTLC3Q9NUV7 552 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 MYPNQ86TC9 1320 aa7.69□□□□□ -1.18
COL11A1-208ENST00000470170 GAAP10253 952 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 CNGB1Q14028 1251 aaPredicted RBP7.68□□□□□ -1.18
COL11A1-208ENST00000470170 SART3Q15020 963 aaKnown RBP7.68□□□□□ -1.18
COL11A1-208ENST00000470170 ESPNLQ6ZVH7 1005 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 CMTM4Q8IZR5 234 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 ARL8AQ96BM9 186 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 MFSD3Q96ES6 412 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 MMRN2Q9H8L6 949 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.68□□□□□ -1.18
COL11A1-208ENST00000470170 PARPBPQ9NWS1 579 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 PCDHB6Q9Y5E3 794 aa7.68□□□□□ -1.18
COL11A1-208ENST00000470170 ST20-MTHFSA0A0A6YYL1 179 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 STC2O76061 302 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 FSBPO95073 299 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 MAN2A2P49641 1150 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 SCNN1BP51168 640 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 MAN2A1Q16706 1144 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 GSPT2Q8IYD1 628 aaKnown RBP7.67□□□□□ -1.18
COL11A1-208ENST00000470170 MB21D1Q8N884 522 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 NEU4Q8WWR8 484 aaPredicted RBP7.67□□□□□ -1.18
COL11A1-208ENST00000470170 PGBD4Q96DM1 585 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 ZNF512Q96ME7 567 aaPredicted RBP7.67□□□□□ -1.18
COL11A1-208ENST00000470170 GPR87Q9BY21 358 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 ING3Q9NXR8 418 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 USP36Q9P275 1121 aaKnown RBP7.67□□□□□ -1.18
COL11A1-208ENST00000470170 USP18Q9UMW8 372 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 PLAAQ9Y263 795 aa7.67□□□□□ -1.18
COL11A1-208ENST00000470170 MTSS1O43312 755 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 ADCYAP1R1P41586 468 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 NPEPPSP55786 919 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 IL2P60568 153 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 SLC25A3Q00325 362 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 CD69Q07108 199 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 SPIDRQ14159 915 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 GPR158Q5T848 1215 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
COL11A1-208ENST00000470170 AHI1Q8N157 1196 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 CDYL2Q8N8U2 506 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 PPP1R14CQ8TAE6 165 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 ZNF483Q8TF39 744 aaPredicted RBP7.66□□□□□ -1.18
COL11A1-208ENST00000470170 TRIM8Q9BZR9 551 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 SLC2A4RGQ9NR83 387 aa7.66□□□□□ -1.18
COL11A1-208ENST00000470170 REXO2Q9Y3B8 237 aaKnown RBP7.66□□□□□ -1.18
COL11A1-208ENST00000470170 PFKMP08237 780 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 LSSP48449 732 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 RABGGTBP53611 331 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 PHC1P78364 1004 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 TERF2Q15554 542 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 MFSD5Q6N075 450 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 KIAA0907Q7Z7F0 614 aaPredicted RBP7.65□□□□□ -1.18
COL11A1-208ENST00000470170 ZNF610Q8N9Z0 462 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 OR2W6PQ8NHA6 318 aa7.65□□□□□ -1.18
COL11A1-208ENST00000470170 ATXN2LQ8WWM7 1075 aaKnown RBP7.65□□□□□ -1.18
COL11A1-208ENST00000470170 FDXACB1Q9BRP7 624 aaPredicted RBP7.65□□□□□ -1.18
COL11A1-208ENST00000470170 KLRG2A4D1S0 409 aaPredicted RBP7.64□□□□□ -1.19
COL11A1-208ENST00000470170 ALDH1A2O94788 518 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 FKBP9O95302 570 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 LY86O95711 162 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 LSP1P33241 339 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 OCRLQ01968 901 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 TOB2Q14106 344 aaPredicted RBP7.64□□□□□ -1.19
COL11A1-208ENST00000470170 FAM214AQ32MH5 1076 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 C1QL3Q5VWW1 255 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 FKBP9P1Q75LS8 142 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 UNC5BQ8IZJ1 945 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 MENTQ9BUN1 341 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
COL11A1-208ENST00000470170 PRSS38A1L453 326 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 GSG1L2A8MUP6 293 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 CFBP00751 764 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 ADH4P08319 380 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 TGFB2P61812 414 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 ZNF662Q6ZS27 426 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
COL11A1-208ENST00000470170 MDGA1Q8NFP4 955 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 LEO1Q8WVC0 666 aaPredicted RBP7.63□□□□□ -1.19
COL11A1-208ENST00000470170 GAB3Q8WWW8 586 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
COL11A1-208ENST00000470170 CLIP3Q96DZ5 547 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 MNTQ99583 582 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 SLITRK6Q9H5Y7 841 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 EMC7Q9NPA0 242 aa7.63□□□□□ -1.19
COL11A1-208ENST00000470170 XDHP47989 1333 aa7.62□□□□□ -1.19
COL11A1-208ENST00000470170 A0A087X0B3 334 aa7.62□□□□□ -1.19
COL11A1-208ENST00000470170 FAM20BO75063 409 aa7.62□□□□□ -1.19
COL11A1-208ENST00000470170 MFAP3LO75121 409 aa7.62□□□□□ -1.19
COL11A1-208ENST00000470170 IPO13O94829 963 aaKnown RBP7.62□□□□□ -1.19
COL11A1-208ENST00000470170 SEC24DO94855 1032 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms