RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 GRID2IPA4D2P6 1211 aa15.06■□□□□ 0
GPC1-208ENST00000469694 YBX3P16989 372 aaKnown RBP eCLIP15.06■□□□□ 0
GPC1-208ENST00000469694 ITGB5P18084 799 aa15.06■□□□□ 0
GPC1-208ENST00000469694 RIPK1Q13546 671 aa15.06■□□□□ 0
GPC1-208ENST00000469694 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
GPC1-208ENST00000469694 CPLX4Q7Z7G2 160 aa15.06■□□□□ 0
GPC1-208ENST00000469694 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
GPC1-208ENST00000469694 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
GPC1-208ENST00000469694 EIF2AK1Q9BQI3 630 aaKnown RBP15.06■□□□□ 0
GPC1-208ENST00000469694 KIF9Q9HAQ2 790 aa15.06■□□□□ 0
GPC1-208ENST00000469694 PPP1R9AQ9ULJ8 1098 aa15.06■□□□□ 0
GPC1-208ENST00000469694 KDM3AQ9Y4C1 1321 aa15.06■□□□□ 0
GPC1-208ENST00000469694 EME2A4GXA9 379 aaPredicted RBP15.06■□□□□ 0
GPC1-208ENST00000469694 TBX3O15119 743 aa15.06■□□□□ 0
GPC1-208ENST00000469694 KRT18P05783 430 aaKnown RBP15.06■□□□□ 0
GPC1-208ENST00000469694 MYBP10242 640 aa15.06■□□□□ 0
GPC1-208ENST00000469694 BZW1Q7L1Q6 419 aaKnown RBP15.06■□□□□ 0
GPC1-208ENST00000469694 OTOP1Q7RTM1 612 aa15.06■□□□□ 0
GPC1-208ENST00000469694 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
GPC1-208ENST00000469694 NELFCDQ8IXH7 590 aa15.06■□□□□ 0
GPC1-208ENST00000469694 KLRG1Q96E93 195 aa15.06■□□□□ 0
GPC1-208ENST00000469694 SH3GL3Q99963 347 aa15.06■□□□□ 0
GPC1-208ENST00000469694 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
GPC1-208ENST00000469694 ISCUQ9H1K1 167 aa15.06■□□□□ 0
GPC1-208ENST00000469694 BHMT2Q9H2M3 363 aa15.06■□□□□ 0
GPC1-208ENST00000469694 C15orf41Q9Y2V0 281 aa15.06■□□□□ 0
GPC1-208ENST00000469694 SSC5DA1L4H1 1573 aa15.05■□□□□ 0
GPC1-208ENST00000469694 PVALEFA0A1B0GWK0 134 aa15.05■□□□□ 0
GPC1-208ENST00000469694 ADM5C9JUS6 153 aa15.05■□□□□ 0
GPC1-208ENST00000469694 RAD51CO43502 376 aa15.05■□□□□ 0
GPC1-208ENST00000469694 BUB1O43683 1085 aa15.05■□□□□ 0
GPC1-208ENST00000469694 EIF2AK2P19525 551 aaKnown RBP15.05■□□□□ 0
GPC1-208ENST00000469694 DRD4P21917 467 aa15.05■□□□□ 0
GPC1-208ENST00000469694 RPA1P27694 616 aa15.05■□□□□ 0
GPC1-208ENST00000469694 SLC12A3P55017 1021 aa15.05■□□□□ 0
GPC1-208ENST00000469694 ODF2Q5BJF6 829 aa15.05■□□□□ 0
GPC1-208ENST00000469694 NSMFQ6X4W1 530 aa15.05■□□□□ 0
GPC1-208ENST00000469694 TPH2Q8IWU9 490 aa15.05■□□□□ 0
GPC1-208ENST00000469694 TRPC6Q9Y210 931 aa15.05■□□□□ 0
GPC1-208ENST00000469694 CCT8L1PA6NM43 557 aa15.05■□□□□ -0
GPC1-208ENST00000469694 EPHB6O15197 1021 aa15.05■□□□□ -0
GPC1-208ENST00000469694 ANP32DO95626 131 aa15.05■□□□□ -0
GPC1-208ENST00000469694 ECHS1P30084 290 aa15.05■□□□□ -0
GPC1-208ENST00000469694 RPS6P62753 249 aaKnown RBP15.05■□□□□ -0
GPC1-208ENST00000469694 EHHADHQ08426 723 aa15.05■□□□□ -0
GPC1-208ENST00000469694 ADCY2Q08462 1091 aa15.05■□□□□ -0
GPC1-208ENST00000469694 TRAF1Q13077 416 aa15.05■□□□□ -0
GPC1-208ENST00000469694 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ -0
GPC1-208ENST00000469694 AGBL2Q5U5Z8 902 aa15.05■□□□□ -0
GPC1-208ENST00000469694 FAM114A1Q8IWE2 563 aa15.05■□□□□ -0
GPC1-208ENST00000469694 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
GPC1-208ENST00000469694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.05■□□□□ -0
GPC1-208ENST00000469694 WRAP73Q9P2S5 460 aaPredicted RBP15.05■□□□□ -0
GPC1-208ENST00000469694 ZNF112Q9UJU3 913 aa15.05■□□□□ -0
GPC1-208ENST00000469694 SFI1A8K8P3 1242 aa15.04■□□□□ -0
GPC1-208ENST00000469694 RSPH10B2B2RC85 870 aa15.04■□□□□ -0
GPC1-208ENST00000469694 VWA5AO00534 786 aa15.04■□□□□ -0
GPC1-208ENST00000469694 GAS7O60861 476 aa15.04■□□□□ -0
GPC1-208ENST00000469694 PSMD10O75832 226 aa15.04■□□□□ -0
GPC1-208ENST00000469694 RSPH10BP0C881 870 aa15.04■□□□□ -0
GPC1-208ENST00000469694 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
GPC1-208ENST00000469694 HSD17B4P51659 736 aa15.04■□□□□ -0
GPC1-208ENST00000469694 LRRC45Q96CN5 670 aa15.04■□□□□ -0
GPC1-208ENST00000469694 DYDC2Q96IM9 177 aa15.04■□□□□ -0
GPC1-208ENST00000469694 SPAG5Q96R06 1193 aa15.04■□□□□ -0
GPC1-208ENST00000469694 TAAR1Q96RJ0 339 aa15.04■□□□□ -0
GPC1-208ENST00000469694 SYT17Q9BSW7 474 aa15.04■□□□□ -0
GPC1-208ENST00000469694 FAM207AQ9NSI2 230 aaPredicted RBP15.04■□□□□ -0
GPC1-208ENST00000469694 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
GPC1-208ENST00000469694 CASP5P51878 434 aa15.04■□□□□ -0
GPC1-208ENST00000469694 ASTE1Q2TB18 679 aaPredicted RBP15.04■□□□□ -0
GPC1-208ENST00000469694 FAM26FQ5R3K3 315 aa15.04■□□□□ -0
GPC1-208ENST00000469694 CENPPQ6IPU0 288 aa15.04■□□□□ -0
GPC1-208ENST00000469694 ERMNQ8TAM6 284 aa15.04■□□□□ -0
GPC1-208ENST00000469694 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
GPC1-208ENST00000469694 SAAL1Q96ER3 474 aa15.04■□□□□ -0
GPC1-208ENST00000469694 NOVA2Q9UNW9 492 aaKnown RBP15.04■□□□□ -0
GPC1-208ENST00000469694 DNM3Q9UQ16 869 aa15.04■□□□□ -0
GPC1-208ENST00000469694 SEMA3FQ13275 785 aa15.03■□□□□ -0
GPC1-208ENST00000469694 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
GPC1-208ENST00000469694 SLMAPQ14BN4 828 aa15.03■□□□□ -0
GPC1-208ENST00000469694 SYTL5Q8TDW5 730 aaPredicted RBP15.03■□□□□ -0
GPC1-208ENST00000469694 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
GPC1-208ENST00000469694 REEP2Q9BRK0 252 aa15.03■□□□□ -0
GPC1-208ENST00000469694 RUSC1Q9BVN2 902 aa15.03■□□□□ -0
GPC1-208ENST00000469694 UNC45AQ9H3U1 944 aa15.03■□□□□ -0
GPC1-208ENST00000469694 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
GPC1-208ENST00000469694 POLR2AP24928 1970 aaKnown RBP15.03■□□□□ -0
GPC1-208ENST00000469694 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
GPC1-208ENST00000469694 SLITRK3O94933 977 aa15.03■□□□□ -0
GPC1-208ENST00000469694 GSTA1P08263 222 aa15.03■□□□□ -0
GPC1-208ENST00000469694 ERVK-9P63128 1117 aa15.03■□□□□ -0
GPC1-208ENST00000469694 GFPT1Q06210 699 aaPredicted RBP15.03■□□□□ -0
GPC1-208ENST00000469694 CCDC63Q8NA47 563 aa15.03■□□□□ -0
GPC1-208ENST00000469694 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
GPC1-208ENST00000469694 SIK3Q9Y2K2 1263 aa15.03■□□□□ -0
GPC1-208ENST00000469694 L3MBTL1Q9Y468 752 aa15.03■□□□□ -0
GPC1-208ENST00000469694 BICDL2A1A5D9 508 aa15.03■□□□□ -0
GPC1-208ENST00000469694 MYCLP12524 364 aaPredicted RBP15.03■□□□□ -0
GPC1-208ENST00000469694 TNNC1P63316 161 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms